Escherichia coli UCD_JA23_pb |
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Putative Escherichia coli UCD_JA23_pb RM systems
Ref: Coil,D.A. et al. unpublished
REBASE ref # 18751
Contig set: 4,904,536 bp
GenBank #: JMJB00000000 (NZ_JMJB00000000)
REBASE acronym: EcoJA23P
Org_num: 14500
All begin EH64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9945 | endoribonuclease SymE | |||
| 9950 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.EcoJA23PI |
| ??? | M | M.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | M.EcoJA23PI |
| 9960 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | EcoJA23PIP |
| 9965 | 452 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3950 | Fis family transcriptional regulator | |||
| 3955 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoJA23PORF3955P |
| 3960 | 59 aa hypothetical protein | |||
| 4560 | ribulose-phosphate 3-epimerase | |||
| 4565 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoJA23PDam |
| 4570 | cell division protein DamX | |||
| 19710 | multidrug DMT transporter | |||
| 19715 | V | V.SflC32DcmP (74% identity) | V.EcoJA23PDcmP | |
| 19720 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoJA23PDcmP |
| 19725 | hydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9705 | integrase | |||
| 9715 | R | EcoUTI89IP (99% identity) | CACAG | EcoJA23PIIP |
| 9720 | M | M.EcoUTI89I (100% identity) | CACAG | M.EcoJA23PII |
| 9730 | 233 aa hypothetical protein | |||