Escherichia coli UCD_JA65 |
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Putative Escherichia coli UCD_JA65 RM systems
Ref: Coil,D. et al. unpublished
REBASE ref # 18751
Contig set: 4,802,037 bp
GenBank #: JFFN00000000 (NZ_JFFN00000000)
REBASE acronym: EcoJA65
Org_num: 14491
All begin BU69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21805 | pseudogene | |||
| 21810 | M | M.SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | M.EcoJA65ORF21810P |
| 21815 | S | S.SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | S.EcoJA65ORF21810P |
| ??? | R | EcoS88ORF4968P (100% identity) | AGCANNNNNNTGA | EcoJA65ORF21810P |
| 21825 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15200 | hydrolase | |||
| 15205 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoJA65DcmP |
| 15210 | V | V.SflSTLE3DcmP (100% identity) | V.EcoJA65DcmP | |
| 15215 | multidrug DMT transporter | |||
| 8915 | ribulose-phosphate 3-epimerase | |||
| 8920 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoJA65DamP |
| 8925 | cell division protein DamX | |||
| 21365 | integrase | |||
| 21370 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoJA65ORF21370P |
| 21375 | 59 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16295 | maturation control protein | |||
| 16300 | R | EcoST361ORF24765P (100% identity) | CAGCAG | EcoJA65ORF16305P |
| 16305 | M | M.EcoJA65PII (100% identity) | CAGCAG | M.EcoJA65ORF16305P |
| 16310 | modulator protein | |||