Vibrio cholerae InDRE 3140 |
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Putative Vibrio cholerae InDRE 3140 RM systems
Ref: Diaz-Quinonez,A. et al. MMWR Morb. Mortal. Wkly. Rep. 63 (25), 552-553 (2014)
REBASE ref # 18679
GenBank #: JPHJ00000000
REBASE acronym: VchO1
Org_num: 14375
All begin IB84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6155 | pseudogene | |||
| 6160 | R | VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | VchO1ORF6180P |
| 6165 | 663 aa hypothetical protein | |||
| 6170 | 470 aa hypothetical protein | |||
| 6175 | S | S.VspNIH41ORF1746P (99% identity) | AAGNNNNNNCATC | S.VchO1ORF6180P |
| 6180 | M | M.VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | M.VchO1ORF6180P |
| 6185 | 687 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14820 | hemagglutinin | |||
| 14825 | M | M.VspNIH41ORF3529P (94% identity) | M.VchO1ORF14825P | |
| 14830 | 141 aa hypothetical protein | |||
| 10340 | ribulose-phosphate 3-epimerase | |||
| 10345 | M | M.VspNIH41DamP (100% identity) | GATC | M.VchO1DamP |
| 10350 | cell division protein DamX | |||
| 18855 | guanosine 5-monophosphate oxidoreductase | |||
| ??? | M | M.VspNIH41ORF700P (100% identity) | RCCGGY | M.VchO1ORF18860P |
| 18865 | pseudogene | |||