Burkholderia pseudomallei BDT |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Burkholderia pseudomallei BDT RM systems
Ref: Daligault,H.E. et al. Genome Announc 2 (6) (2014)
REBASE ref # 18633
GenBank #: JOTS00000000
REBASE acronym: BpsBDT
Org_num: 14357
All begin DO66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3778 | 57 aa hypothetical protein | |||
| 3779 | R | BpsKORF945P (100% identity) | BpsBDTORF3782P | |
| 3780 | 310 aa hypothetical protein | |||
| 3781 | S | S.BpsW30ORF2481P (100% identity) | S.BpsBDTORF3782P | |
| 3782 | M | M.BpsW30ORF2481P (100% identity) | M.BpsBDTORF3782P | |
| 3783 | 127 aa hypothetical protein | |||
| 995 | 64 aa hypothetical protein | |||
| 996 | M | M.RsoCMR15ORF30587P (89% identity) | M.BpsBDTORF996P | |
| 997 | S | S.Ppn3I (55% identity) | S.BpsBDTORF996P | |
| 998 | R | RsoCMR15ORF30587P (92% identity) | BpsBDTORF996P | |
| 999 | DEAD/DEAH box helicase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3960 | tryptophan synthase, alpha subunit | |||
| 3961 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.BpsBDTORF3961P |
| 3962 | tryptophan synthase, beta subunit | |||
| 5831 | replicative DNA helicase | |||
| 5832 | M | M.BpsR733ORF1965P (99% identity) | M.BpsBDTORF5832P | |
| 5833 | 319 aa hypothetical protein | |||
| 4619 | immunity 32 family protein | |||
| 4620 | M | M.BpsEY1ORF4267P (100% identity) | M.BpsBDTORF4620P | |
| 4621 | gp26a | |||
| 5863 | 217 aa hypothetical protein | |||
| 5864 | M | M.BpsBESORF1982P (61% identity) | M.BpsBDTORF5864P | |
| 5865 | HNH endonuclease family protein | |||
| 2272 | SCO1/SenC family protein | |||
| 2273 | M | M.BpsBESORF2265P (99% identity) | M.BpsBDTORF2273P | |
| 2274 | bacteriophage Rz lysis family protein | |||
| 1878 | transcription activator | |||
| ??? | M | DNA methylase | M.BpsBDTORF1879P | |
| 1880 | phage tail protein I | |||
| 2314 | gp56 | |||
| 2315 | M | M.BpsBESORF2307P (96% identity) | CCCGGG | M.BpsBDTORF2315P |
| 2316 | phage regulatory CII family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4368 | gram-negative porin family protein | |||
| 4369 | M | M.BpsE8ORF3897P (99% identity) | M.BpsBDTORF4369P | |
| 4370 | R | BpsR456ORF945P (100% identity) | BpsBDTORF4369P | |
| 4371 | gram-negative porin family protein | |||
| 1510 | peptidase S49 family protein | |||
| 1511 | M | M.Pspye3ORF11610P (71% identity) | M.BpsBDTORF1511P | |
| 1512 | R | Bps4503ORF2413P (99% identity) | BpsBDTORF1511P | |
| 1513 | phage terminase, small subunit, P27 family | |||