Nitrincola species A-D6 |
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Putative Nitrincola species A-D6 RM systems
Ref: Valdes,N. et al. Genome Announc 2 (6) (2014)
REBASE ref # 18632
GenBank #: JRLB00000000
REBASE acronym: NspAD6
Org_num: 14428
All begin LH51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16430 | 174 aa hypothetical protein | |||
| 16435 | S | S.Aha261ORF3150P (43% identity) | S1.NspAD6ORF5015P | |
| ??? | S | S.Hsp770ORF18315P (15% identity) | S2.NspAD6ORF5015P | |
| 16440 | M | M.AaeB11ORF31260P (87% identity) | M.NspAD6ORF5015P | |
| 16445 | addiction module protein | |||
| 16450 | R | EspLSJC7ORFEP (83% identity) | NspAD6ORF5015P | |
| 16455 | transcriptional regulator | |||
| 5000 | transcriptional regulator | |||
| 5005 | R | EspLSJC7ORFEP (83% identity) | NspAD6ORF5015P | |
| 5010 | addiction module protein | |||
| 5015 | M | M.AaeB11ORF31260P (87% identity) | M.NspAD6ORF5015P | |
| 5025 | S | S.Aha261ORF3150P (43% identity) | S1.NspAD6ORF5015P | |
| 5030 | S | S.Hsp770ORF18315P (15% identity) | S2.NspAD6ORF5015P | |
| 5035 | 170 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1075 | 485 aa hypothetical protein | |||
| 1080 | M | M.PspXY2ORF65P (85% identity) | M.NspAD6ORF1080P | |
| 1085 | helicase | |||
| ??? | RM | Cte712ORFJP (69% identity) | NspAD6ORF1080P | |
| 1095 | 151 aa hypothetical protein | |||
| 1100 | pseudogene | |||
| 1105 | R | Pca24390ORFDP (98% identity) | GTCGAC | NspAD6ORF1105P |
| 1110 | pseudogene | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12160 | AIPR family protein | |||
| 12165 | M | M.DspN47ORF45940P (68% identity) | M.NspAD6ORF12140P | |
| 12170 | R | PstPS71ORF4420P (81% identity) | NspAD6ORF12140P | |
| 12175 | 191 aa hypothetical protein | |||