Helicobacter species MIT 11-5569 |
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Putative Helicobacter species MIT 11-5569 RM systems
Ref: Sheh,A. et al. unpublished
REBASE ref # 18605
GenBank #: JRPB00000000
REBASE acronym: Hsp5569
Org_num: 14436
All begin LS70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9425 | pseudogene | |||
| 9430 | M | DNA methyltransferase | M.Hsp5569ORF9430P | |
| 9435 | 91 aa hypothetical protein | |||
| 9440 | 88 aa hypothetical protein | |||
| 9445 | 191 aa hypothetical protein | |||
| 9450 | S | S2.Hwi7711ORF6725P (45% identity) | S.Hsp5569ORF9430P | |
| 9455 | 541 aa hypothetical protein | |||
| 9460 | R | 154 aa hypothetical protein | Hsp5569ORF9430P | |
| 9465 | arabinose ABC transporter permease | |||
| 10005 | arabinose 5-phosphate isomerase | |||
| 10010 | S | 207 aa hypothetical protein | S.Hsp5569ORF10010P | |
| 9645 | pseudogene | |||
| 9650 | S | S1.Hsp5569ORF1720P (87% identity) | S.Hsp5569ORF9650P | |
| 1080 | chemotaxis protein | |||
| 1085 | R | Cco76339ORF13650P (69% identity) | Hsp5569ORF1085P | |
| 1090 | 309 aa hypothetical protein | |||
| 1095 | S | S.Cje6954ORF7500P (36% identity) | S.Hsp5569ORF1085P | |
| 1100 | 134 aa hypothetical protein | |||
| 1705 | pseudogene | |||
| ??? | S | S.Hsp5569ORF9650P (87% identity) | S1.Hsp5569ORF1720P | |
| 1715 | S | S.SspNW10ORFCP (28% identity) | S2.Hsp5569ORF1720P | |
| 1720 | M | M.Hsp6451ORF7710P (78% identity) | M.Hsp5569ORF1720P | |
| 1725 | serine/threonine protein kinase | |||
| 3770 | 2-hydroxyacid dehydrogenase | |||
| 3775 | M | M.Hwi430ORFBP (75% identity) | M.Hsp5569ORF3775P | |
| 3780 | S | S.Hwi435ORF2180P (53% identity) | S1.Hsp5569ORF3775P | |
| 3785 | S | S2.Hwi170ORF7345P (63% identity) | S2.Hsp5569ORF3775P | |
| 3790 | 67 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9885 | 157 aa hypothetical protein | |||
| 9890 | R | Hsp1616ORF1245P (68% identity) | GGCC | Hsp5569ORF9895P |
| 9895 | M | M.Hsp1616ORF1245P (71% identity) | GGCC | M.Hsp5569ORF9895P |
| 9900 | GCN5 family acetyltransferase | |||
| 6235 | MFS transporter | |||
| 6240 | M | M.Hsp5569ORF85P (100% identity) | M.Hsp5569ORF6240P | |
| 6245 | 108 aa hypothetical protein | |||
| 80 | MFS transporter | |||
| 85 | M | M.Hsp5569ORF6240P (100% identity) | M.Hsp5569ORF85P | |
| 90 | 108 aa hypothetical protein | |||
| 9470 | glyoxalase | |||
| 9475 | RM | Hsp5293ORF5905P (36% identity) | Hsp5569ORF9475P | |
| 6290 | conjugal transfer protein | |||
| 6295 | M | M.Hsp5569ORF140P (100% identity) | CCGG | M.Hsp5569ORF6295P |
| 6300 | R | Hsp5569ORF140P (100% identity) | CCGG | Hsp5569ORF6295P |
| 6305 | adenylosuccinate lyase | |||
| 6305 | adenylosuccinate lyase | |||
| 6310 | R | Hsp5569ORF160P (100% identity) | CCNNGG | Hsp5569ORF6315P |
| 6315 | M | M.Hsp5569ORF160P (100% identity) | CCNNGG | M.Hsp5569ORF6315P |
| 6320 | pseudouridine synthase | |||
| 7310 | 249 aa hypothetical protein | |||
| 7315 | M | M.HhiYS1ORFA1P (71% identity) | CCWGG | M.Hsp5569ORF7315P |
| 7320 | 283 aa hypothetical protein | |||
| 135 | conjugal transfer protein | |||
| 140 | M | M.Hsp5569ORF6295P (100% identity) | CCGG | M.Hsp5569ORF140P |
| 145 | R | Hsp5569ORF6295P (100% identity) | CCGG | Hsp5569ORF140P |
| 150 | adenylosuccinate lyase | |||
| 7860 | isocitrate dehydrogenase | |||
| 7865 | R | HhiYS1ORFMP (44% identity) | CCATC | Hsp5569ORF7880P |
| 7870 | 88 aa hypothetical protein | |||
| 7875 | 238 aa hypothetical protein | |||
| 7880 | M | M1.Hsp6451ORF2790P (61% identity) | CCATC | M.Hsp5569ORF7880P |
| 7885 | amino acid ABC transporter ATPase | |||
| 150 | adenylosuccinate lyase | |||
| 155 | R | Hsp5569ORF6315P (100% identity) | CCNNGG | Hsp5569ORF160P |
| 160 | M | M.Hsp5569ORF6315P (100% identity) | CCNNGG | M.Hsp5569ORF160P |
| 165 | pseudouridine synthase | |||
| 7640 | Lon protease | |||
| 7645 | M | M.Hma5501ORF1815P (38% identity) | M.Hsp5569ORF7645P | |
| 7650 | HNH endonuclease | |||
| 8195 | transcriptional regulator | |||
| 8200 | M | M.HhiYS1ORFDP (86% identity) | GATC | M.Hsp5569ORF8200P |
| ??? | R | HbiMUIIP (63% identity) | GATC | Hsp5569ORF8200P |
| 8215 | dihydroxy-acid dehydratase | |||
| 1430 | M | 291 aa hypothetical protein | BA | M.Hsp5569ORF1430P |
| 1435 | 173 aa hypothetical protein | |||
| 4185 | polar amino acid ABC transporter permease | |||
| 4190 | M | M.Csp16192ORF1770P (77% identity) | GTNNAC | M.Hsp5569ORF4190P |
| 4195 | R | Csp16192ORF1770P (57% identity) | GTNNAC | Hsp5569ORF4190P |
| 4200 | amino acid ABC transporter permease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10015 | R | Hsp5293ORF2640P (65% identity) | Hsp5569ORF10020P | |
| ??? | M | M2.Hsp6451ORF10445P (63% identity) | M.Hsp5569ORF10020P | |
| 10030 | aldo/keto reductase | |||
| 10375 | M | M.Hsp1616ORF1555P (29% identity) | M.Hsp5569ORF10375P | |
| 10380 | 247 aa hypothetical protein | |||
| 3750 | 93 aa hypothetical protein LS69_08625, partial | |||
| 3755 | M | M.HpyCA18ORF3475P (29% identity) | M.Hsp5569ORF3755P | |
| 3760 | 470 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8180 | 212 aa hypothetical protein | |||
| 8185 | R | Hsp6451McrCP (52% identity) | Hsp5569McrCP | |
| 8190 | R | Cje5128McrBP (30% identity) | Hsp5569McrBP | |
| 8195 | transcriptional regulator | |||