Helicobacter species MIT 03-1616 |
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Putative Helicobacter species MIT 03-1616 RM systems
Ref: Sheh,A. et al. unpublished
REBASE ref # 18605
GenBank #: JROY00000000
REBASE acronym: Hsp1616
Org_num: 14434
All begin LS67_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7060 | R | Hty1ORF707P (44% identity) | Hsp1616ORF7110P | |
| 7065 | 384 aa hypothetical protein | |||
| 7070 | 172 aa hypothetical protein | |||
| 7075 | RelE/StbE family addiction module toxin | |||
| 7080 | 76 aa hypothetical protein | |||
| 7085 | 465 aa hypothetical protein | |||
| 7090 | S | S.Hty1ORF707P (62% identity) | S.Hsp1616ORF7110P | |
| 7095 | RelE/StbE family addiction module toxin | |||
| 7100 | 73 aa hypothetical protein | |||
| 7105 | 246 aa hypothetical protein | |||
| 7110 | M | M.Hty6810ORF3025P (99% identity) | M.Hsp1616ORF7110P | |
| 7115 | glutamine amidotransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6175 | RM | Hty1ORF1541P (53% identity) | Hsp1616ORF6175P | |
| 6185 | peroxidase | |||
| 8480 | RM | Hci12219ORF276P (79% identity) | Hsp1616ORF8480P | |
| 8485 | 73 aa hypothetical protein | |||
| 8885 | 63 aa hypothetical protein | |||
| 8890 | R | Hty6810ORF155P (100% identity) | GTAC | Hsp1616ORF8895P |
| ??? | M | M.Hty6810ORF155P (91% identity) | GTAC | M.Hsp1616ORF8895P |
| 8910 | adenylosuccinate lyase | |||
| 6675 | 1112 aa hypothetical protein | |||
| 6680 | R | Hty6810ORF2770P (93% identity) | GTAC | Hsp1616ORF6685P |
| 6685 | M | M.Hty6810ORF2770P (96% identity) | GTAC | M.Hsp1616ORF6685P |
| 6690 | 62 aa hypothetical protein | |||
| 6310 | 193 aa hypothetical protein | |||
| 6315 | M | M.Hty6810ORF4675P (95% identity) | M.Hsp1616ORF6315P | |
| 6320 | 79 aa conserved hypothetical protein TIGR01671 | |||
| 1235 | 676 aa hypothetical protein | |||
| 1240 | M | M.Hty1ORF934P (74% identity) | GTSAC | M.Hsp1616ORF1240P |
| 1245 | modification methylase | |||
| 1240 | DNA-cytosine methyltransferase | |||
| 1245 | M | M.Hmu12714ORF1118P (92% identity) | GGCC | M.Hsp1616ORF1245P |
| 1250 | R | HmuST1ORF6080P (96% identity) | GGCC | Hsp1616ORF1245P |
| 1255 | 187 aa hypothetical protein | |||
| 5725 | lipoprotein | |||
| 5730 | M | M.Hty6810ORF9525P (97% identity) | GTNNAC | M.Hsp1616ORF5730P |
| 5735 | R | Hty6810ORF9525P (98% identity) | GTNNAC | Hsp1616ORF5730P |
| 5740 | 202 aa hypothetical protein | |||
| 6700 | 6-O-methylguanine DNA methyltransferase | |||
| 6705 | M | M1.HmuST1ORF7005P (94% identity) | GAAGA | M1.Hsp1616ORF6705P |
| 6710 | M | M2.HmuST1ORF7005P (86% identity) | GAAGA | M2.Hsp1616ORF6705P |
| 6715 | R | HbiMUORF4735P (67% identity) | GAAGA | Hsp1616ORF6705P |
| 6720 | transcriptional regulator | |||
| 1255 | 187 aa hypothetical protein | |||
| 1260 | M | M.Hty6810ORF3565P (92% identity) | GATC | M.Hsp1616ORF1260P |
| 1265 | R | Hty1IIP (98% identity) | GATC | Hsp1616ORF1260P |
| 1270 | GMP synthase | |||
| 5740 | 202 aa hypothetical protein | |||
| 5745 | R | Hsp6451ORF8925P (86% identity) | CGWCG | Hsp1616ORF5750P |
| 5750 | M | M.Hsp6451ORF8925P (84% identity) | CGWCG | M.Hsp1616ORF5750P |
| 5755 | dihydroxy-acid dehydratase | |||
| 6830 | 184 aa hypothetical protein | |||
| 6835 | M | M.Hty6810ORF4885P (97% identity) | M.Hsp1616ORF6835P | |
| 6840 | R | Cco79ORF6365P (75% identity) | Hsp1616ORF6835P | |
| 6845 | sodium:glutamate symporter | |||
| 6745 | 370 aa hypothetical protein | |||
| 6750 | M | M.HheORF1050P (98% identity) | CATG | M.Hsp1616ORF6750P |
| 6755 | heme ABC transporter substrate-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1535 | 201 aa hypothetical protein | |||
| 1540 | R | Hty6810ORF2920P (85% identity) | Hsp1616ORF1555P | |
| 1545 | 2-hydroxyacid dehydrogenase | |||
| 1550 | ATPase | |||
| 1555 | M | M.HbiMUORF4545P (80% identity) | M.Hsp1616ORF1555P | |
| 1560 | 157 aa hypothetical protein | |||