Klebsiella pneumoniae subsp. pneumoniae KPNIH30 |
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Putative Klebsiella pneumoniae subsp. pneumoniae KPNIH30 RM systems
Ref: Conlan,S. et al. Sci Transl Med 6 (254), 254RA126 (2014)
REBASE ref # 19233
| Sequence length: | GenBank #: | |
| Chromosome: | 5,306,618 bp | CP009872 |
| plasmid pKPN-b9c: | 50,051 bp | CP009874 |
| plasmid pKpQIL-531: | 113,639 bp | CP009875 |
REBASE acronym: KpnNIH30
Org_num: 14189
All begin KPNIH30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pKpQIL-531 | ||||
| 27425 | transposase | |||
| 27430 | R | Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | KpnNIH30IP |
| 27435 | S | S.Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | S.KpnNIH30I |
| 27440 | M | M.Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | M.KpnNIH30I |
| 27445 | 71 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6350 | dcm methylase | |||
| 6355 | M | M.Kpss50ORF20150P (100% identity) | GATC | M.KpnNIH30ORF6355P |
| 6360 | exonuclease | |||
| 8850 | 75 aa hypothetical protein | |||
| 8855 | M | M.Ksp1927ORF17200P (100% identity) | GATC | M.KpnNIH30ORF8855P |
| 8860 | endonuclease | |||
| 9750 | 261 aa hypothetical protein | |||
| ??? | M | M.KpnS127ORF16810P (100% identity) | GATC | M.KpnNIH30ORF9755P |
| 9760 | 76 aa hypothetical protein | |||
| 17460 | multidrug DMT transporter | |||
| 17465 | V | V.KspC31DcmP (75% identity) | V.KpnNIH30DcmP | |
| 17470 | M | M.Kqu6DcmP (82% identity) | CCWGG | M.KpnNIH30Dcm |
| 17475 | hydrolase | |||
| 24750 | ribulose-phosphate 3-epimerase | |||
| 24755 | M | M.KspC31DamP (100% identity) | GATC | M.KpnNIH30DamP |
| 24760 | cell division protein DamX | |||
| plasmid pKPN-b9c | ||||
| 26895 | 407 aa hypothetical protein | |||
| 26900 | RM | KquL22ORFEP (100% identity) | GTTCNAC | KpnNIH30III |
| 26905 | 189 aa hypothetical protein | |||
| plasmid pKpQIL-531 | ||||
| 27490 | 76 aa hypothetical protein | |||
| ??? | M | M.Kqu56ORFAP (100% identity) | M.KpnNIH30ORF27495P | |
| 27500 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17600 | SpnT protein | |||
| 17605 | M | M.Kpni512ORF1793P (100% identity) | CGCATC | M.KpnNIH30II |
| 17610 | R | Kpni512ORF1793P (100% identity) | CGCATC | KpnNIH30IIP |
| 17615 | type IV pilin | |||