Pseudomonas species 1-7 |
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Putative Pseudomonas species 1-7 RM systems
Ref: Tian,J. et al. Genome Announc 2 (5) (2014)
REBASE ref # 18489
GenBank #: JPRQ00000000
REBASE acronym: Psp17C
Org_num: 14133
All begin JF55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17095 | ATPase AAA | |||
| 17100 | R | Pgu31ORF1335P (99% identity) | Psp17CORF17105P | |
| 17105 | M | M.HaeGOM5ORF17820P (95% identity) | M.Psp17CORF17105P | |
| ??? | S | S.PspDV1ORF870P (51% identity) | S1.Psp17CORF17105P | |
| ??? | S | S.Pst19ORF20700P (39% identity) | S2.Psp17CORF17105P | |
| 17115 | ATP-dependent OLD family endonuclease | |||
| 11375 | 408 aa hypothetical protein | |||
| ??? | R | Pst29243ORF3940P (94% identity) | Psp17CORF11380P | |
| 11385 | 108 aa hypothetical protein | |||
| 24005 | 288 aa hypothetical protein | |||
| 24015 | S | S.Sku7850SORF9725P (81% identity) | S.Psp17CORF24020P | |
| 24020 | M | M.Sku7850SORF9725P (74% identity) | M.Psp17CORF24020P | |
| 24025 | 111 aa hypothetical protein | |||
| 6410 | 112 aa hypothetical protein | |||
| 6420 | R | PmeMAE1KORF4420P (98% identity) | Psp17CORF6440P | |
| 6425 | 214 aa hypothetical protein | |||
| 6430 | 234 aa hypothetical protein | |||
| 6435 | 227 aa hypothetical protein | |||
| 6440 | M | M.Psp1333ORFBP (85% identity) | M.Psp17CORF6440P | |
| 6445 | S | S.Pfl44ORFEP (50% identity) | S.Psp17CORF6440P | |
| 6450 | 554 aa hypothetical protein | |||
| 15735 | restriction endonuclease | |||
| 15740 | R | Psp3919ORF16490P (97% identity) | Psp17CORF15755P | |
| ??? | S | S.Pae095ORF23795P (88% identity) | S.Psp17CORF15755P | |
| 15750 | pseudogene | |||
| 15755 | M | M.PaeCH45ORF21765P (99% identity) | M.Psp17CORF15755P | |
| 15765 | transposon Tn21 resolvase | |||
| 21350 | 169 aa hypothetical protein | |||
| 21355 | M | M.Ppu715ORF6100P (100% identity) | M.Psp17CORF21355P | |
| ??? | S | S.Ppu715ORF6100P (100% identity) | S.Psp17CORF21355P | |
| 21370 | Fic family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19350 | carbamoyl phosphate synthase small subunit | |||
| 19355 | M | M.PweA20ORF16655P (96% identity) | GGWCC | M.Psp17CORF19355P |
| 19360 | R | PspDV1ORF4795P (100% identity) | Psp17CORF19355P | |
| 19365 | dihydrodipicolinate reductase | |||
| 1160 | 338 aa hypothetical protein | |||
| 1165 | M | M.VspI (97% identity) | ATTAAT | M.Psp17CORF1165P |
| ??? | R | PbaD1VP (73% identity) | ATTAAT | Psp17CORF1165P |
| 1180 | 100 aa hypothetical protein | |||
| 13875 | 525 aa hypothetical protein | |||
| 13880 | M | M.PaeR031ORFAP (74% identity) | M.Psp17CORF13880P | |
| 13885 | DNA topoisomerase III | |||
| 7485 | integrase | |||
| 7495 | RM | PspDV1ORF21245P (99% identity) | Psp17CORF7495P | |
| 7500 | XRE family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12800 | 5-oxo-L-prolinase | |||
| 12805 | R | Psi32246ORF995P (99% identity) | Psp17CORFAP | |
| ??? | M | M.Pde9ORF20010P (75% identity) | M.Psp17CORFAP | |
| 12820 | addiction module protein | |||
| 11715 | DNA methylase N-4 | |||
| 11720 | R | Dsp3051ORF1320P (97% identity) | Psp17CORF11715P | |
| 11725 | DNA repair protein | |||
| 19230 | 3-oxoacyl-ACP synthase | |||
| 19240 | R | 253 aa hypothetical protein | Psp17CORF19240P | |
| 7195 | glycerophosphodiester phosphodiesterase | |||
| 7200 | R | Pol10860ORF4496P (96% identity) | Psp17CORF7210P | |
| 7205 | 2-hydroxyacid dehydrogenase | |||
| 7210 | M | M.Pfl14440ORFAP (68% identity) | M.Psp17CORF7210P | |
| 7215 | 249 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15715 | 135 aa hypothetical protein | |||
| 15735 | R | PaeCH45MrrP (100% identity) | Psp17CMrrP | |
| 15740 | Restriction endonuclease, type I, EcoRI, R | |||