Smithella species SCADC |
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Putative Smithella species SCADC RM systems
Ref: Tan,B. et al. Genome Announc 2 (5) (2014)
REBASE ref # 18409
GenBank #: JQDQ00000000
REBASE acronym: SspADC
Org_num: 14079
All begin ER57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | SspADCORF1715P (90% identity) | SspADCORFAP | |
| 11590 | pseudogene | |||
| 11595 | M | M.DbaSRB1ORF941P (81% identity) | M.SspADCORF11595P | |
| 11600 | 204 aa hypothetical protein | |||
| 11605 | 338 aa hypothetical protein | |||
| ??? | S | S.Mva003ORF10680P (28% identity) | S.SspADCORF11595P | |
| 11620 | R | JspAM49SspAP (82% identity) | SspADCORF11595P | |
| 11625 | metal-dependent hydrolase | |||
| 9320 | 69 aa hypothetical protein | |||
| ??? | M | M.SspF21ORFCP (67% identity) | M.SspADCORF9345P | |
| 17885 | zinc metalloprotease | |||
| 17890 | R | SwoGORF2258P (79% identity) | SspADCORF17890P | |
| 17895 | 443 aa hypothetical protein | |||
| 1705 | 354 aa hypothetical protein | |||
| 1715 | R | SspADCORFAP (90% identity) | SspADCORF1715P | |
| ??? | S | S.GprSS5ORF8980P (34% identity) | S.SspADCORF1715P | |
| 10850 | metal-dependent hydrolase | |||
| 10855 | R | TspsG1ORF54P (77% identity) | SspADCORF10875P | |
| 10865 | S | S2.Pvu1507ORF17790P (57% identity) | S.SspADCORF10875P | |
| 10870 | 2-hydroxyacid dehydrogenase | |||
| 10875 | M | M.GloIAEORF16590P (85% identity) | M.SspADCORF10875P | |
| 10880 | 192 aa hypothetical protein | |||
| 17920 | 1270 aa hypothetical protein | |||
| ??? | S | S.Bph1100ORFDP (37% identity) | S.SspADCORF17930P | |
| 17930 | M | M.DspTolMORF14140P (83% identity) | M.SspADCORF17930P | |
| 17935 | pseudogene | |||
| 14505 | 141 aa hypothetical protein | |||
| 14520 | M | M.Dco13527IV (47% identity) | M.SspADCORF14520P | |
| 14525 | pseudogene | |||
| ??? | S | S.MspBLZ2ORFGP (22% identity) | S1.SspADCORF14520P | |
| ??? | S | 113 aa hypothetical protein Z964_08735 | S2.SspADCORF14520P | |
| 14540 | C_GCAxxG_C_C family redox protein | |||
| 14170 | 72 aa hypothetical protein | |||
| 14185 | R | DspN47ORF1610P (84% identity) | SspADCORF14200P | |
| ??? | S | S.Cin211ORF6720P (39% identity) | S.SspADCORF14200P | |
| 14195 | 296 aa hypothetical protein | |||
| 14200 | M | M.MrusP2ORF7450P (77% identity) | M.SspADCORF14200P | |
| 14210 | 375 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1930 | 309 aa hypothetical protein | |||
| 1935 | M | M.Rsp234ORF11610P (40% identity) | TCTAGA | M.SspADCORF1935P |
| 1945 | 88 aa hypothetical protein | |||
| 1950 | 138 aa hypothetical protein | |||
| 1955 | 138 aa hypothetical protein | |||
| 1960 | 121 aa hypothetical protein | |||
| 1970 | RM | RspRSORF1476BP (54% identity) | SspADCORF1935P | |
| 1980 | 97 aa hypothetical protein | |||
| 7835 | 397 aa hypothetical protein | |||
| 7840 | RM | DbaRAAP1ORFCP (37% identity) | SspADCORF7840P | |
| 14070 | M | M.SspADCORF14370P (93% identity) | CGGCCG | M.SspADCORF14070P |
| 14075 | R | SspADCORF14370P (100% identity) | CGGCCG | SspADCORF14070P |
| 14080 | 88 aa hypothetical protein | |||
| 14370 | M | M.SspADCORF14070P (93% identity) | CGGCCG | M.SspADCORF14370P |
| 14375 | R | SspADCORF14070P (100% identity) | CGGCCG | SspADCORF14370P |
| 14380 | 88 aa hypothetical protein | |||
| 7215 | M | M.Dma2077ORF5920P (66% identity) | M1.SspADCORF7215P | |
| 7220 | R | CspMSGORFOP (63% identity) | SspADCORF7215P | |
| ??? | M | DNA methylase N-4/N-6 | GATC | M2.SspADCORF7215P |
| 7230 | 144 aa hypothetical protein | |||
| 10435 | 92 aa hypothetical protein | |||
| 10440 | R | DspSRB1ORF12075P (74% identity) | CCGCGG | SspADCORF10445P |
| 10445 | M | M.Mme286ORFK1P (71% identity) | CCGCGG | M.SspADCORF10445P |
| 10450 | V | V.TbaJJ14ORF7410P (52% identity) | V.SspADCORF10445P | |
| 10455 | aminotransferase | |||
| 10245 | 140 aa hypothetical protein | |||
| ??? | M | M.SspADCORF10265P (77% identity) | TTCGAA | M.SspADCORF10250P |
| 10260 | 140 aa hypothetical protein | |||
| 10260 | 140 aa hypothetical protein | |||
| 10265 | M | M.SspADCORF10250P (77% identity) | TTCGAA | M.SspADCORF10265P |
| 10270 | 167 aa hypothetical protein | |||
| 8420 | 686 aa hypothetical protein | |||
| 8430 | RM | SspD17ORF1895P (79% identity) | SspADCORF8430P | |
| 8435 | 82 aa hypothetical protein | |||
| 655 | 378 aa hypothetical protein | |||
| 660 | RM | Ial16511ORF1932P (21% identity) | SspADCORF660P | |
| 12835 | 250 aa hypothetical protein | |||
| 12840 | RM | LtaYMTK2ORF2490P (55% identity) | SspADCORF12840P | |
| 12845 | 449 aa hypothetical protein | |||
| 9780 | 59 aa hypothetical protein | |||
| 9785 | R | SspF21ORF2915P (90% identity) | CGATCG | SspADCORF9790P |
| 9790 | M | M.SspF21ORF2915P (91% identity) | CGATCG | M.SspADCORF9790P |
| 9795 | alanyl-tRNA synthetase | |||
| 11910 | 67 aa hypothetical protein | |||
| 11915 | M | M.Csp4045ORF10110P (66% identity) | CAGCTG | M.SspADCORF11915P |
| ??? | R | MhiM3ORF2585P (56% identity) | SspADCORF11915P | |
| 11930 | 90 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3785 | 890 aa hypothetical protein | |||
| ??? | M | M.SspF21ORFDP (36% identity) | M.SspADCORFBP | |
| 3810 | transcriptional regulator | |||
| 3015 | ABC transporter permease | |||
| 3025 | R | SspD17ORF4920P (97% identity) | SspADCORF3040P | |
| 3030 | DNA helicase RecG | |||
| 3035 | 864 aa hypothetical protein | |||
| 3040 | M | M.DbaSRB1ORF475P (49% identity) | M.SspADCORF3040P | |
| 3045 | 83 aa hypothetical protein | |||
| 17605 | 114 aa hypothetical protein | |||
| 17615 | M | M.DlyBLORF1612P (59% identity) | M.SspADCORF17615P | |
| 17620 | R | Vsp2425ORF5805P (46% identity) | SspADCORF17615P | |
| 17625 | phage infection protein | |||
| 16180 | 565 aa hypothetical protein | |||
| 16185 | R | DbaSRB2ORF3498P (54% identity) | SspADCORF16190P | |
| 16190 | M | M.DbaSRB1ORF2329P (46% identity) | M.SspADCORF16190P | |
| 16195 | 334 aa hypothetical protein | |||