Vibrio tubiashii ATCC 19109 |
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Putative Vibrio tubiashii ATCC 19109 RM systems
Ref: Richards,G.P. et al. unpublished
REBASE ref # 18754
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,294,490 bp | CP009354 |
| chromosome 2: | 1,766,582 bp | CP009355 |
| plasmid p123: | 122,808 bp | CP009357 |
REBASE acronym: Vtu19109
Org_num: 14158
All begin IX91_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 5650 | restriction endonuclease | |||
| 5655 | R | Vtu1337ORF21742P (100% identity) | YACNNNNNCTCC | Vtu19109IIP |
| 5660 | M | M.Vtu1337ORF21742P (100% identity) | YACNNNNNCTCC | M.Vtu19109II |
| 5665 | S | S.Vtu1337ORF21742P (100% identity) | YACNNNNNCTCC | S.Vtu19109II |
| 5670 | ABC transporter | |||
| chromosome 2 | ||||
| 20575 | integrase | |||
| 20580 | R | Vtu1337ORF6266P (100% identity) | GYAYNNNNNNGCTG | Vtu19109IIIP |
| 20585 | 281 aa hypothetical protein | |||
| 20590 | S | S.Vtu1337ORF6266P (100% identity) | GYAYNNNNNNGCTG | S.Vtu19109III |
| 20595 | M | M.Vtu1337ORF6266P (100% identity) | GYAYNNNNNNGCTG | M.Vtu19109III |
| 20600 | resolvase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 14140 | ribulose-phosphate 3-epimerase | |||
| 14145 | M | M.Vtu1337DamP (100% identity) | GATC | M.Vtu19109Dam |
| 14150 | cell division protein DamX | |||
| plasmid p123 | ||||
| 25190 | ATPase | |||
| 25195 | RM | Asa13899ORFCP (47% identity) | CACRAYC | Vtu19109I |
| 25200 | alkaline phosphatase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 5645 | XRE family transcriptional regulator | |||
| 5650 | R | Vtu1337Mrr2P (100% identity) | Vtu19109MrrP | |
| 5655 | restriction endonuclease subunit R | |||
| chromosome 2 | ||||
| 20580 | Restriction endonuclease, type I, EcoRI, R | |||
| 20585 | R | Vtu1337McrBP (100% identity) | Vtu19109McrBP | |
| 20590 | restriction endonuclease subunit S | |||