Mycoplasma species VCU_M1 |
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Putative Mycoplasma species VCU_M1 RM systems
Ref: Fettweis,J.M. et al. PLoS ONE 9 (10), E110943 (2014)
REBASE ref # 18513
Complete sequence: 618,983 bp
GenBank #: CP007711
REBASE acronym: MspM1
Org_num: 14012
All begin MGM1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1000 | 50S ribosomal protein L17 | |||
| 1010 | S | S2.MgiB3ORF490P (75% identity) | S.MspM1ORF1010P | |
| 1020 | enolase | |||
| 1880 | GTP-binding protein Era | |||
| 1890 | S | type I restriction modification DNA specificity | S.MspM1ORF1890P | |
| 1900 | DNA repair protein RecO | |||
| 2560 | L-serine dehydratase | |||
| 2580 | S | S.MspM1ORF1890P (80% identity) | S.MspM1ORF2580P | |
| 2590 | endonuclease IV | |||
| 3940 | 316 aa hypothetical protein | |||
| 3950 | S | S.MmyC264ORF2140P (23% identity) | S.MspM1ORF3950P | |
| 3970 | pseudogene | |||
| 4890 | deoxyguanosine kinase | |||
| 4910 | M | type I restriction modification system DNA | M.MspM1ORF4910P | |
| 4920 | S | type I restriction modification DNA specificity | S1.MspM1ORF4910P | |
| 4930 | S | type I restriction modification DNA specificity | S2.MspM1ORF4910P | |
| 4940 | R | type I site-specific deoxyribonuclease | MspM1ORF4910P | |
| 4950 | HD domain-containing phosphohydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 580 | N-acetylglucosamine-6-phosphate deacetylase | |||
| 590 | S | S.MgiB3ORF60P (55% identity) | S.MspM1ORF600P | |
| 600 | RM | MgiB3ORF60P (98% identity) | MspM1ORF600P | |
| 610 | anaerobic ribonucleoside-triphosphate reductase | |||
| 1470 | 50S ribosomal protein L11 | |||
| 1480 | M | M.MgiB3ORF207P (99% identity) | GANTC | M.MspM1ORF1480P |
| 1490 | R | MgiB3ORF207P (98% identity) | GANTC | MspM1ORF1480P |
| 1500 | rubrerythrin | |||
| 4970 | GTP-binding protein LepA | |||
| 5010 | R | MgiB3ORF501P (100% identity) | GATC | MspM1ORF5020P |
| 5020 | M | M.MgiB3ORF501P (100% identity) | GATC | M.MspM1ORF5020P |
| 5030 | rubredoxin | |||
| 5840 | 180 aa hypothetical protein | |||
| 5850 | M | M.FnuDII (78% identity) | CGCG | M.MspM1ORF5850P |
| 5870 | R | Fnu1330ORF955P (68% identity) | CGCG | MspM1ORF5850P |
| 5860 | 464 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1960 | desulfoferrodoxin | |||
| 1970 | R | MgiB3ORF157P (99% identity) | MspM1ORF1980P | |
| 1980 | M | type III restriction-modification system | M.MspM1ORF1980P | |
| 1990 | 151 aa hypothetical protein | |||