Corynebacterium doosanense CAU 212 |
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Putative Corynebacterium doosanense CAU 212 RM systems
Ref: Schaffert,L. et al. unpublished
REBASE ref # 18393
| Sequence length: | GenBank #: | |
| Chromosome: | 2,671,798 bp | CP006764 |
| plasmid pCdoos1: | 27,197 bp | CP006765 |
REBASE acronym: Cdo212
Org_num: 13901
All begin CDOO_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pCdoos1 | ||||
| 13275 | transposase | |||
| 13280 | R | CdiDoORF11180P (66% identity) | ATGNNNNNNCTGG | Cdo212ORF13295P |
| 13285 | 205 aa hypothetical protein | |||
| ??? | S | S.Mfo6368ORF3914P (35% identity) | ATGNNNNNNCTGG | S.Cdo212ORF13295P |
| 13295 | M | M.Cdi693ORF4565P (76% identity) | ATGNNNNNNCTGG | M.Cdo212ORF13295P |
| 13300 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 250 | 278 aa hypothetical protein | |||
| 255 | RM | Kva80ORF2013P (94% identity) | RM1.Cdo212ORF255P | |
| 260 | M | M2.Kva80ORF2013P (90% identity) | M.Cdo212ORF255P | |
| 265 | RM | M1.AjeJS280ORF12185P (89% identity) | RM2.Cdo212ORF255P | |
| 270 | excisionase | |||
| 1220 | NAD(P)H-quinone oxidoreductase | |||
| 1230 | RM | Csp3630ORF3010P (26% identity) | Cdo212ORF1230P | |
| 1235 | transposase | |||
| 3820 | 990 aa hypothetical protein | |||
| 3830 | RM | PniHce1ORF711P (67% identity) | Cdo212ORF3830P | |
| 3835 | S | S.Csp17035ORF16410P (30% identity) | S.Cdo212ORF3830P | |
| 3840 | 138 aa hypothetical protein | |||
| 6945 | pseudogene | |||
| 6950 | RM | Csp320ORF6855P (69% identity) | Cdo212ORF6950P | |
| 6955 | tetraacyldisaccharide 4-kinase | |||
| 10820 | oligoribonuclease | |||
| 10830 | M | M.CspZJ599ORF4460P (77% identity) | GCCGGC | M.Cdo212ORF10830P |
| 10835 | 263 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12155 | DNA mismatch repair protein MutT | |||
| 12160 | R | Cpi11862ORF1989P (50% identity) | Cdo212ORF12160P | |
| 12165 | 59 aa hypothetical protein | |||