Helicobacter cinaedi CCUG 18818 |
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Putative Helicobacter cinaedi CCUG 18818 RM systems
Ref: Shen,Z. et al. Genome Announc 2 (5), e00857-14 (2014)
REBASE ref # 18258
Contig set: 2,182,709 bp
GenBank #: ABQT00000000 (NZ_ABQT00000000)
REBASE acronym: Hci18818
Org_num: 8377
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | type II restriction endonuclease | |||
| ??? | R | HciORF2281P (100% identity) | Hci18818ORFHP | |
| ??? | S | S.HciORF2281P (100% identity) | S.Hci18818ORFHP | |
| ??? | M | M.HciORF2281P (100% identity) | M.Hci18818ORFHP | |
| ??? | restriction endonuclease BslI | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HciP01DORFMP (93% identity) | ACTGG | M.Hci18818ORFB1P |
| ??? | R | HciORF1543P (100% identity) | GATC | Hci18818ORFA1P |
| ??? | M | M.Hci798ORFDP (100% identity) | GATC | M.Hci18818ORFA1P |
| ??? | M | M.HciORF741P (100% identity) | TCGA | M.Hci18818ORFNP |
| ??? | R | HciORF741P (100% identity) | TCGA | Hci18818ORFNP |
| ??? | RM | HciORF1773P (100% identity) | Hci18818ORFAP | |
| ??? | R | HciORF922P (100% identity) | GTAC | Hci18818ORFSP |
| ??? | M | M.Hci1432ORFAP (100% identity) | GTAC | M.Hci18818ORFSP |
| ??? | 84 aa hypothetical protein | |||
| ??? | M | M.HciORF2196P (100% identity) | CGWCG | M.Hci18818ORFKP |
| ??? | R | HciORF2196P (100% identity) | CGWCG | Hci18818ORFKP |
| ??? | DNA adenine methylase | |||
| ??? | endonuclease | |||
| ??? | M | M1.HciORF2198P (100% identity) | GGATG | M1.Hci18818ORFLP |
| ??? | M | M2.HciORF2198P (100% identity) | GGATG | M2.Hci18818ORFLP |
| ??? | DNA methyltransferase | |||
| ??? | M | M.Hci798ORFSP (100% identity) | M.Hci18818ORFQP | |
| ??? | type II restriction endonuclease MboI | |||
| ??? | M | M.HciORF784P (100% identity) | CCGG | M.Hci18818ORFOP |
| ??? | 444 aa hypothetical protein | |||
| ??? | 444 aa hypothetical protein | |||
| ??? | R | HciORF793P (100% identity) | GATC | Hci18818ORFPP |
| ??? | M | M.HciORF793P (100% identity) | GATC | M.Hci18818ORFPP |
| ??? | M | M.Hci7095ORF5440P (100% identity) | GANTC | M.Hci18818ORFRP |
| ??? | M | M.HciP01DORFBP (100% identity) | CCWGG | M.Hci18818ORFXP |
| ??? | RM | HciORF1922P (100% identity) | Hci18818ORFCP | |
| ??? | RM | HciORF1047P (100% identity) | Hci18818ORFWP | |
| ??? | R | HciP01DORFGP (100% identity) | TCNNGA | Hci18818ORFGP |
| ??? | M | M.HciP01DORFGP (100% identity) | TCNNGA | M.Hci18818ORFGP |
| ??? | RM | HciORF1073P (55% identity) | Hci18818ORFTP | |
| ??? | 717 aa hypothetical protein | |||
| ??? | RNA helicase | |||
| ??? | RM | Hci7095ORF4820P (68% identity) | Hci18818ORFUP | |
| ??? | 319 aa hypothetical protein | |||
| ??? | R | HciORF1953P (100% identity) | GAAGA | Hci18818ORFBP |
| ??? | M | M1.HciORF1953P (100% identity) | GAAGA | M1.Hci18818ORFBP |
| ??? | M | M1.Hci7095ORF660P (68% identity) | GAAGA | M2.Hci18818ORFBP |
| ??? | 717 aa hypothetical protein | |||
| ??? | RM | HciORF1075P (100% identity) | Hci18818ORFVP | |
| ??? | RM | HciORF28P (98% identity) | GAGNNNNNGT | Hci18818ORFFP |
| ??? | R | Hci1432ORFMP (97% identity) | CATG | Hci18818ORFDP |
| ??? | M | M.HciORF102P (100% identity) | CATG | M.Hci18818ORFDP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HciORF1430P (100% identity) | M.Hci18818ORFZP | |
| ??? | R | Hci7095ORF3055P (100% identity) | Hci18818ORFZP | |
| ??? | M | M.HciP01DORFIP (100% identity) | M.Hci18818ORFJP | |
| ??? | R | HciORF2191P (100% identity) | Hci18818ORFJP | |
| ??? | 84 aa hypothetical protein | |||
| ??? | M | M.HciORF61P (100% identity) | M.Hci18818ORFEP | |
| ??? | R | HciORF61P (100% identity) | Hci18818ORFEP | |