Helicobacter canis NCTC 12740 |
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Putative Helicobacter canis NCTC 12740 RM systems
Ref: Earl,A. et al. unpublished
REBASE ref # 18258
Contig set: 1,924,983 bp
GenBank #: AZJJ00000000 (NZ_AZJJ00000000)
REBASE acronym: Hca12740
Org_num: 13903
All begin HMPREF2087_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 904 | adenylosuccinate lyase | |||
| 905 | R | Hca1463ORFCP (100% identity) | GGCC | Hca12740ORF906P |
| 906 | M | M.Hca1463ORFCP (98% identity) | GGCC | M.Hca12740ORF906P |
| 907 | 526 aa hypothetical protein | |||
| 1467 | 152 aa hypothetical protein | |||
| 1468 | RM | Hca1463ORFMP (100% identity) | Hca12740ORF1468P | |
| 1469 | 143 aa hypothetical protein | |||
| 936 | cysteine synthase A | |||
| 937 | RM | Hca1463ORFFP (100% identity) | Hca12740ORF937P | |
| 938 | 104 aa hypothetical protein | |||
| 1496 | 43 aa hypothetical protein | |||
| 1497 | R | Hca1463ORFNP (100% identity) | CCTC | Hca12740ORF1498P |
| 1498 | M | M1.Hca1463ORFNP (100% identity) | CCTC | M1.Hca12740ORF1498P |
| 1499 | M | M2.Hca1463ORFNP (98% identity) | CCTC | M2.Hca12740ORF1498P |
| 1500 | dihydroxy-acid dehydratase | |||
| 1504 | 95 aa hypothetical protein | |||
| 1505 | RM | Hca1463ORFQP (100% identity) | Hca12740ORF1505P | |
| 1506 | 198 aa hypothetical protein | |||
| 1513 | 356 aa hypothetical protein | |||
| 1514 | R | Hca1463ORFPP (100% identity) | GCNGC | Hca12740ORF1515P |
| 1515 | M | M.Hca1463ORFPP (100% identity) | GCNGC | M.Hca12740ORF1515P |
| 1516 | 307 aa hypothetical protein | |||
| 1068 | 404 aa hypothetical protein | |||
| 1069 | RM | Hca1463ORFDP (100% identity) | Hca12740ORF1069P | |
| 1070 | 1009 aa hypothetical protein | |||
| 1157 | 378 aa hypothetical protein | |||
| 1158 | M | M.Hca1463ORFAP (100% identity) | CCATC | M.Hca12740ORF1158P |
| 1159 | 239 aa hypothetical protein | |||
| 1160 | 59 aa hypothetical protein | |||
| 1161 | R | Hca1463ORFAP (100% identity) | CCATC | Hca12740ORF1158P |
| 1162 | 194 aa hypothetical protein | |||
| 535 | 373 aa hypothetical protein | |||
| 536 | RM | Hca1463ORFEP (100% identity) | Hca12740ORF536P | |
| 537 | 212 aa hypothetical protein | |||
| 623 | alanyl-tRNA synthetase | |||
| 624 | RM | Hca1463ORFHAP (100% identity) | RM1.Hca12740ORF624P | |
| 625 | RM | Hca1463ORFHBP (100% identity) | RM2.Hca12740ORF624P | |
| 626 | 238 aa hypothetical protein | |||
| 627 | 274 aa hypothetical protein | |||
| 628 | 183 aa hypothetical protein | |||
| 629 | R | Hca1463ORFOP (100% identity) | CATG | Hca12740ORF624P |
| 630 | 94 aa hypothetical protein | |||
| 631 | M | M.Hca1463ORFOP (100% identity) | CATG | M.Hca12740ORF624P |
| 632 | dihydroneopterin aldolase | |||
| 807 | 124 aa hypothetical protein | |||
| 808 | RM | Hca1463ORFGP (100% identity) | Hca12740ORF808P | |
| 809 | 47 aa hypothetical protein | |||
| 809 | 47 aa hypothetical protein | |||
| 810 | RM | M2.Hca1463ORFGP (100% identity) | Hca12740ORF810P | |
| 811 | 239 aa hypothetical protein | |||
| 810 | 707 aa hypothetical protein | |||
| 811 | M | M1.Hca1463ORFGP (100% identity) | M.Hca12740ORF811P | |
| 812 | 78 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 914 | 103 aa hypothetical protein | |||
| 915 | M | M.Hca1463ORFIP (94% identity) | M.Hca12740ORF915P | |
| 916 | R | Hca1463ORFIP (100% identity) | Hca12740ORF915P | |
| 917 | malonyl CoA-acyl carrier protein transacylase | |||
| 984 | 524 aa hypothetical protein | |||
| 985 | R | Hca1463ORFJP (100% identity) | Hca12740ORF986P | |
| ??? | M | M.Hca1463ORFJP (100% identity) | M.Hca12740ORF986P | |
| 989 | 670 aa hypothetical protein | |||
| 1673 | 115 aa hypothetical protein | |||
| 1674 | M | M.Hca1463ORFBP (95% identity) | M.Hca12740ORF1674P | |
| 1675 | 41 aa hypothetical protein | |||
| 1676 | R | Hca1463ORFBP (100% identity) | Hca12740ORF1674P | |
| 1677 | 277 aa hypothetical protein | |||