Vibrio cholerae 2012EL-2176 |
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Putative Vibrio cholerae 2012EL-2176 RM systems
Ref: Folster,J.P. et al. unpublished
REBASE ref # 18383
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,043,139 bp | CP007634 |
| chromosome 2: | 1,047,617 bp | CP007635 |
| plasmid unnamed: | 167,267 bp | CP007636 |
REBASE acronym: Vch2176
Org_num: 13880
All begin EN18_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 11970 | membrane protein | |||
| 11975 | R | VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | Vch2176IP |
| 11980 | 663 aa hypothetical protein | |||
| 11985 | 470 aa hypothetical protein | |||
| 11990 | S | S.VspNIH41ORF1746P (99% identity) | AAGNNNNNNCATC | S.Vch2176I |
| 11995 | M | M.VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | M.Vch2176I |
| 12000 | 687 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 16155 | ribulose-phosphate 3-epimerase | |||
| 16160 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch2176Dam |
| 16165 | cell division protein DamX | |||
| chromosome 2 | ||||
| 685 | hemagglutinin | |||
| 690 | M | M.VspNIH41ORF3529P (94% identity) | M.Vch2176ORF690P | |
| 695 | 141 aa hypothetical protein | |||
| 4670 | guanosine 5-monophosphate oxidoreductase | |||
| ??? | M | M.VspNIH41ORF700P (100% identity) | RCCGGY | M.Vch2176ORF4675P |
| 4680 | 638 aa hypothetical protein | |||
| plasmid unnamed | ||||
| 5640 | 100 aa hypothetical protein | |||
| 5645 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Vch2176ORF5645P |
| 5650 | 143 aa hypothetical protein | |||