Lactobacillus salivarius JCM1046 |
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Putative Lactobacillus salivarius JCM1046 RM systems
Ref: Raftis,E.J. et al. BMC Genomics 15, 771 (2014)
REBASE ref # 18350
Complete sequence: 1,836,297 bp
GenBank #: CP007646
REBASE acronym: Lsa1046
Org_num: 13821
All begin LSJ_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 168 | Restriction endonuclease S subunits | |||
| 169 | R | Lsacp400ORF1801P (100% identity) | Lsa1046ORF171P | |
| 170 | S | S.Lsa258ORF820P (63% identity) | S1.Lsa1046ORF171P | |
| 171 | M | M.Lsacp400ORF1801P (99% identity) | M.Lsa1046ORF171P | |
| 172 | S | S.LsaZLp4bORFJP (39% identity) | S2.Lsa1046ORF171P | |
| 173 | Integrase | |||
| 174 | S | Type I restriction-modification system, | S3.Lsa1046ORF171P | |
| 175 | Mobile element protein | |||
| 935 | Cellobiose PTS, EIIC | |||
| 936 | S | S.EhiS5ORF6640P (60% identity) | S1.Lsa1046ORF939P | |
| 937 | Integrase | |||
| 938 | S | S.SthM368ORF882P (59% identity) | S2.Lsa1046ORF939P | |
| 939 | M | M.Lsacp400ORF20901P (100% identity) | M.Lsa1046ORF939P | |
| 940 | R | Lsacp400ORF20901P (100% identity) | Lsa1046ORF939P | |
| 941 | 78 aa Hypothetical protein | |||
| 1331 | 171 aa Hypothetical protein | |||
| 1332 | R | LsaBNS11ORF7670P (75% identity) | Lsa1046ORF1336BP | |
| 1333 | Transposase ISLasa4k, ISL3 family | |||
| 1334 | R | LsaGJ24ORF656P (24% identity) | Lsa1046ORF1336AP | |
| 1335 | S | S.Lsa258ORF7135P (100% identity) | S.Lsa1046ORF1336P | |
| 1336 | M | M.LsaBNS11ORF7670P (99% identity) | M.Lsa1046ORF1336P | |
| 1337 | 103 aa Hypothetical protein | |||
| 1340 | 424 aa Hypothetical protein | |||
| 1341 | S | S.Lsa006ORF2395P (99% identity) | S.Lsa1046ORF1342P | |
| 1342 | M | M.LfeB44ORF8195P (99% identity) | M.Lsa1046ORF1342P | |
| 1343 | R | Lsa006ORF2395P (99% identity) | Lsa1046ORF1342P | |
| 1344 | 73 aa Hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 471 | Xaa-His dipeptidase | |||
| 472 | M | M2.LsaBNS11ORF3070P (99% identity) | M.Lsa1046ORF472P | |
| ??? | RM | Lsacp400ORF4241P (96% identity) | Lsa1046ORF472P | |
| 475 | RloF | |||
| 1356 | 180 aa Hypothetical protein | |||
| 1357 | M | M.Lre84ORFAP (93% identity) | M.Lsa1046ORF1357P | |
| 1358 | Virulence-related protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1337 | 103 aa Hypothetical protein | |||
| 1338 | R | Lsa006MrrP (100% identity) | Lsa1046MrrP | |
| 1339 | 53 aa Hypothetical protein | |||
| 1496 | Inosine-5-monophosphate dehydrogenase | |||
| 1497 | R | Lsacp400ORF16441P (99% identity) | Lsa1046ORF1497P | |
| 1498 | Protein tyrosine phosphatase | |||