Paenibacillus durus DSM 1735 |
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Putative Paenibacillus durus DSM 1735 RM systems
Ref: den Bakker,H.C. et al. unpublished
REBASE ref # 18360
Complete sequence: 6,038,347 bp
GenBank #: CP009288
REBASE acronym: Pdu1735
Org_num: 13760
All begin PDUR_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4430 | 92 aa hypothetical protein | |||
| 4435 | M | M.BceA1ORF4086P (96% identity) | RAGNNNNNRTGG | M.Pdu1735II |
| 4440 | S | S.GliD10ORF818P (44% identity) | RAGNNNNNRTGG | S.Pdu1735II |
| 4445 | anticodon nuclease | |||
| 4450 | R | Bbr47ORF7110P (95% identity) | RAGNNNNNRTGG | Pdu1735IIP |
| 4455 | seryl-tRNA synthetase | |||
| 19380 | 107 aa hypothetical protein | |||
| ??? | S | S.BspCC42ORF19790P (33% identity) | S.Pdu1735ORF19400AP | |
| ??? | M | M.Pdu1735ORF19395P (100% identity) | M.Pdu1735ORF19400P | |
| 19405 | S | 67 aa hypothetical protein | S.Pdu1735ORF19400BP | |
| 19410 | R | Pdu1735ORF19395P (100% identity) | Pdu1735ORF19400P | |
| 19415 | 225 aa hypothetical protein | |||
| ??? | restriction endonuclease subunit S | |||
| ??? | M | M.Pdu1735ORF19400P (100% identity) | M.Pdu1735ORF19395P | |
| 19405 | 67 aa hypothetical protein | |||
| 19410 | R | Pdu1735ORF19400P (100% identity) | Pdu1735ORF19395P | |
| 19415 | 225 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3805 | 74 aa hypothetical protein | |||
| ??? | M | M.Gst2596ORFAP (75% identity) | ACNNNNNCTCC | M.Pdu1735ORF3815P |
| ??? | R | Asp43ORFPP (53% identity) | ACNNNNNCTCC | Pdu1735ORF3815P |
| 3825 | 98 aa hypothetical protein | |||
| 4470 | 713 aa hypothetical protein | |||
| 4485 | M | M.Pdu1735ORF4660P (91% identity) | M.Pdu1735ORF4485P | |
| 4490 | transposase | |||
| 4655 | 683 aa hypothetical protein | |||
| ??? | M | M.Pdu1735ORF4485P (91% identity) | M.Pdu1735ORF4660P | |
| 4665 | 140 aa hypothetical protein | |||
| 19165 | 111 aa hypothetical protein | |||
| ??? | M | M.Pdo13049ORF36305P (57% identity) | M.Pdu1735ORF19170P | |
| 19175 | 1046 aa hypothetical protein | |||
| ??? | 326 aa hypothetical protein | |||
| 19175 | RM | VchSA10GORF10150P (15% identity) | Pdu1735ORF19175P | |
| 19185 | 691 aa hypothetical protein | |||
| 27555 | DEAD/DEAH box helicase | |||
| 27560 | RM | Psp3514ORF12495P (78% identity) | CACCAC | Pdu1735I |
| 27565 | 132 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3875 | NERD nuclease | |||
| 3880 | R | Psp345McrBP (86% identity) | Pdu1735McrBP | |
| 3885 | 807 aa hypothetical protein | |||
| 3880 | 729 aa hypothetical protein | |||
| 3885 | R | Psp0357McrB3P (85% identity) | Pdu1735McrB2P | |
| 3890 | peptidase | |||