Burkholderia oklahomensis BDU |
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Putative Burkholderia oklahomensis BDU RM systems
Ref: Bishop-Lilly,K.A. et al. unpublished
REBASE ref # 18070
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,192,008 bp | CP008726 |
| chromosome 2: | 3,121,665 bp | CP008727 |
REBASE acronym: BokBDU
Org_num: 13770
All begin DM82_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 736 | copper binding s, plastocyanin/azurin family | |||
| ??? | M | M.BokEORFDP (100% identity) | M.BokBDUORFAP | |
| 737 | immunity 32 family protein | |||
| 1637 | immunity 32 family protein | |||
| ??? | M | M.BokEORFEP (100% identity) | M.BokBDUORF1638P | |
| 1640 | squalene synthase HpnD | |||
| 3054 | transcription activator | |||
| 3055 | M | M.Bok900ORF9290P (100% identity) | M.BokBDUORF3055P | |
| 3056 | phage baseplate assembly V family protein | |||
| 3256 | 358 aa hypothetical protein | |||
| 3257 | R | BokEORFCP (100% identity) | GTCGAC | BokBDUORF3258P |
| 3258 | M | M.BokEORFCP (100% identity) | GTCGAC | M.BokBDUORF3258P |
| 3259 | 51 aa hypothetical protein | |||
| 3342 | phage baseplate assembly V family protein | |||
| 3343 | M | M.Bok900ORF7825P (100% identity) | M.BokBDUORF3339P | |
| 3344 | 167 aa hypothetical protein | |||
| chromosome 2 | ||||
| 5946 | tryptophan synthase, alpha subunit | |||
| ??? | M | M.BokEORFHP (100% identity) | M.BokBDUORF5947P | |
| 5949 | N-(5phosphoribosyl)anthranilate (PRA) isomerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3198 | gram-negative porin family protein | |||
| ??? | M | M.BokEORFAP (100% identity) | M.BokBDUORF3199P | |
| 3200 | R | BokEORFAP (100% identity) | BokBDUORF3199P | |
| 3201 | gram-negative porin family protein | |||
| 3250 | 59 aa hypothetical protein | |||
| ??? | R | BokEORFBP (100% identity) | BokBDUORF3252P | |
| 3252 | M | M.BokEORFBP (100% identity) | M.BokBDUORF3252P | |
| 3253 | phoH-like family protein | |||