Flavobacterium psychrophilum FPG3 |
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Putative Flavobacterium psychrophilum FPG3 RM systems
Ref: MacInnes,J.I. et al. unpublished
REBASE ref # 19025
Complete sequence: 2,715,909 bp
GenBank #: CP007207
REBASE acronym: FpsFPG3
Org_num: 13665
All begin FPG3_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4870 | penicillin-binding protein | |||
| 4875 | R | FpsTRORFEP (100% identity) | GAGNNNNNRTAA | FpsFPG3IVP |
| 4880 | 179 aa hypothetical protein | |||
| 4885 | RlfA protein | |||
| 4890 | S | S.FpsTRORFEP (100% identity) | GAGNNNNNRTAA | S.FpsFPG3IV |
| 4895 | 239 aa hypothetical protein | |||
| 4900 | M | M.FpsTRORFEP (100% identity) | GAGNNNNNRTAA | M.FpsFPG3IV |
| 4905 | 74 aa hypothetical protein | |||
| 6810 | virulence-associated e family protein | |||
| 6820 | M | M.FpsTRORFNP (100% identity) | CAAYNNNNNNTTYG | M.FpsFPG3III |
| 6825 | S | S.FpsTRORFNP (100% identity) | CAAYNNNNNNTTYG | S.FpsFPG3III |
| 6830 | 1620 aa hypothetical protein | |||
| 6830 | 1620 aa hypothetical protein | |||
| 6835 | R | FpsTRORFNP (100% identity) | FpsFPG3ORF6835P | |
| 6840 | 151 aa hypothetical protein | |||
| 10115 | recombinase | |||
| 10120 | M | M.FpsTRORFHP (100% identity) | CTAYNNNNNNRTCNNC | M.FpsFPG3V |
| 10125 | 270 aa hypothetical protein | |||
| 10130 | 502 aa hypothetical protein | |||
| 10135 | S | S.FpsTRORFHP (100% identity) | CTAYNNNNNNRTCNNC | S.FpsFPG3V |
| 10140 | nucleotidyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 180 | succinyl-CoA:3-ketoacid-CoA transferase | |||
| 185 | RM | Fps3660ORF9120P (100% identity) | FpsFPG3ORF185P | |
| 190 | 206 aa hypothetical protein | |||
| 1340 | 330 aa hypothetical protein | |||
| 1345 | RM | FpsTRORFBP (100% identity) | FpsFPG3ORF1345P | |
| 1350 | D-tyrosyl-tRNA(Tyr) deacylase | |||
| 2580 | mannose-1-phosphate guanylyltransferase | |||
| 2585 | M | M.FpsTRORFDP (100% identity) | M.FpsFPG3ORF2585P | |
| 2590 | R | FpsTRORFDP (100% identity) | FpsFPG3ORF2585P | |
| 2595 | 216 aa hypothetical protein | |||
| 5920 | 72 aa hypothetical protein | |||
| 5930 | RM | FpsTRORFFP (100% identity) | FpsFPG3ORF5930P | |
| 5935 | 216 aa hypothetical protein | |||
| 6650 | 59 aa hypothetical protein | |||
| 6655 | M | M.FpsTRI (100% identity) | GATATC | M.FpsFPG3I |
| 6660 | R | FpsTRIP (100% identity) | GATATC | FpsFPG3IP |
| 6665 | 71 aa hypothetical protein | |||
| 7025 | 62 aa hypothetical protein | |||
| 7030 | R | FpsTRORFMP (100% identity) | GCNGC | FpsFPG3ORF7035P |
| 7035 | M | M.Fps3660ORF400P (100% identity) | GCNGC | M.FpsFPG3ORF7035P |
| 7045 | 181 aa hypothetical protein | |||
| 7085 | 170 aa hypothetical protein | |||
| 7090 | R | FpsTRORFKP (100% identity) | GATC | FpsFPG3ORF7095P |
| 7095 | M | M.FpsTRORFKP (100% identity) | GATC | M.FpsFPG3ORF7095P |
| 7100 | C | C.FspM31R6ORF8720P (100% identity) | C.FpsFPG3ORF7095P | |
| 7105 | 113 aa hypothetical protein | |||
| 7170 | 303 aa hypothetical protein | |||
| 7175 | M | M.FpsTRORFLP (100% identity) | GTMKAC | M.FpsFPG3II |
| 7180 | R | FpsTRORFLP (100% identity) | GTMKAC | FpsFPG3IIP |
| 7185 | 234 aa hypothetical protein | |||
| 7190 | pseudogene | |||
| 7195 | R | FpsTRORFJP (100% identity) | FpsFPG3ORF7200P | |
| 7200 | M | M.FpsTRORFJP (100% identity) | GAATTC | M.FpsFPG3ORF7200P |
| 7205 | 69 aa hypothetical protein | |||
| 7890 | alpha/beta hydrolase | |||
| 7895 | RM | Fps3660ORF11765P (100% identity) | FpsFPG3ORF7895P | |
| 7900 | S | S.Fps3660ORF11765P (100% identity) | S.FpsFPG3ORF7895P | |
| 7905 | 244 aa hypothetical protein | |||
| 8180 | 8-amino-7-oxononanoate synthase | |||
| ??? | M | M.FpsTRORFIP (100% identity) | GGNCC | M.FpsFPG3ORFAP |
| 8195 | R | FpsTRORFIP (100% identity) | GGNCC | FpsFPG3ORFAP |
| 8200 | molecular chaperone DnaJ | |||
| 12275 | 73 aa hypothetical protein | |||
| 12280 | M | M.Fps3660ORF9245P (100% identity) | GAATTC | M.FpsFPG3ORF12280P |
| 12285 | R | Fps3660ORF9245P (100% identity) | GAATTC | FpsFPG3ORF12280P |
| 12290 | toxin YoeB | |||