Serratia symbiotica |
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Putative Serratia symbiotica RM systems
Ref: vforay Foray,Vincent. unpublished
REBASE ref # 18113
GenBank #: CCES00000000
REBASE acronym: Ssy23
Org_num: 13719
All begin SYMBAF_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 80005 | conserved exported hypothetical protein | |||
| 80006 | M | M.Ssy23ORF10850P (100% identity) | M.Ssy23ORF80006P | |
| 80007 | Replication gene A protein | |||
| 180017 | 119 aa conserved hypothetical protein | |||
| 180018 | M | M.SmaE36ORF46620P (97% identity) | CCWGG | M.Ssy23ORF180018P |
| 180019 | 689 aa conserved hypothetical protein | |||
| 100015 | 68 aa hypothetical protein | |||
| ??? | M | M2.Ssy23ORF7150P (100% identity) | GATC | M.Ssy23ORFAP |
| 100016 | 147 aa hypothetical protein; DLP12 prophage | |||
| 100015 | 68 aa hypothetical protein | |||
| ??? | M | M.Ssy23ORF9975P (97% identity) | M.Ssy23ORF4115P | |
| 100016 | 147 aa hypothetical protein; DLP12 prophage | |||
| 40071 | BetR domain protein | |||
| 40072 | M | M.Ssy241ORF12820P (100% identity) | M.Ssy23ORF40072P | |
| 40073 | iron-dicitrate transporter subunit ; ATP-binding | |||
| 40079 | transposase | |||
| 40080 | M | M.Ssy241ORF12820P (100% identity) | M.Ssy23ORF40080P | |
| 40081 | tail fibre chaperone; Qin prophage | |||
| 190071 | 73 aa conserved hypothetical protein | |||
| 190072 | M | M.SsyISORF16510P (97% identity) | M.Ssy23ORF190072P | |
| 190073 | 59 aa hypothetical protein | |||
| 110085 | D-ribulose-5-phosphate 3-epimerase | |||
| 110086 | M | M.Ssy241DamP (100% identity) | GATC | M.Ssy23DamP |
| 110087 | 324 aa conserved hypothetical protein | |||
| 30093 | 482 aa conserved hypothetical protein | |||
| 30094 | R | Ssy23ORF10280P (100% identity) | CCGCGG | Ssy23ORF30095P |
| 30095 | M | M.Ssy23ORF10280P (100% identity) | CCGCGG | M.Ssy23ORF30095P |
| 30096 | IS3 element protein InsE (fragment) | |||
| 50152 | bacteriophage protein GP46 | |||
| 50153 | M | M.Ssy23ORF7165P (100% identity) | M.Ssy23ORF50153P | |
| 50154 | Replication gene A protein | |||
| 30156 | 147 aa hypothetical protein; DLP12 prophage | |||
| 30157 | M | M.Ssy23ORF9975P (100% identity) | GATC | M.Ssy23ORF30157P |
| 30158 | 70 aa hypothetical protein | |||
| 50154 | Replication gene A protein | |||
| ??? | M | M2.Ssy23ORF7150P (100% identity) | GATC | M.Ssy23ORFAP |
| 50155 | DNA adenine methylase | |||
| 20165 | Tail fiber assembly protein | |||
| 20166 | M | M.Ssy241ORF4970P (100% identity) | M.Ssy23ORF20166P | |
| 20167 | 2,3-dihydroxybenzoate-AMP ligase component of | |||
| ??? | C-5 cytosine-specific DNA methylase domain-containing protein | |||
| 50155 | M | M1.Ssy23ORF7150P (100% identity) | GATC | M.Ssy23ORF50155P |
| 50156 | Exodeoxyribonuclease VIII | |||
| 160346 | Phage DNA methylase (fragment) | |||
| 160347 | M | M.Ssy23ORF310P (71% identity) | M.Ssy23ORF160347P | |
| 160348 | antitoxin YefM | |||
| 100373 | 118 aa hypothetical protein | |||
| 100374 | M | M.Ssy241ORF4290P (100% identity) | M.Ssy23ORF100374P | |
| 100375 | tail fiber assembly protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | type III restriction endonuclease EcoPI subunit R | AGACC | Ssy23ORF230002P |
| 230002 | M | M.Ssy23ORF8020P (100% identity) | AGACC | M.Ssy23ORF230002P |
| 230003 | 94 aa conserved hypothetical protein | |||