Bacteroides dorei |
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Putative Bacteroides dorei RM systems
Ref: Leonard,M.T. et al. Front Microbiol 5, 361 (2014)
REBASE ref # 18093
Complete sequence: 5,243,219 bp
GenBank #: CP008741
REBASE acronym: BdoB079
Org_num: 13638
All begin GV66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1840 | S-adenosylmethionine tRNA ribosyltransferase | |||
| 1845 | M | M.PmeBin22ORFCP (100% identity) | M.BdoB079ORF1845P | |
| 1850 | S | S1.Hgu7ORFRP (99% identity) | S.BdoB079ORF1845P | |
| 1860 | 365 aa hypothetical protein | |||
| 1865 | R | Pdo17855ORF1705P (100% identity) | BdoB079ORF1845P | |
| 1870 | 343 aa hypothetical protein | |||
| 12485 | 457 aa hypothetical protein | |||
| 12490 | S | S2.Bfr4ORF9055P (100% identity) | S1.BdoB079ORF12520P | |
| ??? | S | S2.Hgu7ORFLP (100% identity) | S2.BdoB079ORF12520P | |
| 12500 | S | S1.Hgu7ORFLP (100% identity) | S3.BdoB079ORF12520P | |
| 12505 | 165 aa hypothetical protein | |||
| 12510 | death-on-curing protein | |||
| 12515 | DNA-binding protein | |||
| 12520 | M | M.Hgu7ORFLP (100% identity) | M.BdoB079ORF12520P | |
| 12525 | R | Hgu7ORFLP (100% identity) | BdoB079ORF12520P | |
| 12530 | C | C.PmeBin57ORFHP (100% identity) | C.BdoB079ORF12520P | |
| 12535 | 247 aa hypothetical protein | |||
| 22125 | cell surface protein | |||
| 22135 | S | S2.Pdo17855ORF22875P (87% identity) | S1.BdoB079ORF22155P | |
| 22140 | integrase | |||
| ??? | S | S4.Pdo17855ORF22875P (100% identity) | S2.BdoB079ORF22155P | |
| 22145 | S | S2.PvuC06ORF3690P (99% identity) | S3.BdoB079ORF22155P | |
| 22150 | 376 aa hypothetical protein | |||
| 22155 | M | M.Pdo3C03ORF2038P (100% identity) | M.BdoB079ORF22155P | |
| 22160 | R | Pdo1ORF14765P (100% identity) | BdoB079ORF22155P | |
| 22165 | C | C.Pvu201ORF22395P (100% identity) | C.BdoB079ORF22155P | |
| 22170 | methionine sulfoxide reductase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7055 | 91 aa hypothetical protein | |||
| 7060 | M | M.Hgu7ORFWP (100% identity) | M.BdoB079ORF7060P | |
| 7065 | 146 aa hypothetical protein | |||
| 10900 | DNA-binding protein | |||
| 10905 | V | V.Pdo1051ORF4310P (100% identity) | V.BdoB079ORF10915P | |
| 10910 | R | R1.Pdo1051ORF4310P (100% identity) | GGCC | R1.BdoB079ORF10915P |
| 10915 | M | M1.Pdo1051ORF4310P (100% identity) | GGCC | M1.BdoB079ORF10915P |
| 10920 | M | M2.Pdo1051ORF4310P (100% identity) | GGCC | M2.BdoB079ORF10915P |
| 10925 | C | C.Pdo1051ORF4310P (100% identity) | C.BdoB079ORF10915P | |
| 10930 | R | R2.Pdo1051ORF4310P (100% identity) | GGCC | R2.BdoB079ORF10915P |
| 10940 | 118 aa hypothetical protein | |||
| 19975 | 201 aa hypothetical protein | |||
| 19980 | M | M.Hgu7ORFIP (100% identity) | TTCGAA | M.BdoB079I |
| 19985 | R | Hgu7ORFIP (100% identity) | TTCGAA | BdoB079IP |
| 19990 | C | C.Hgu7ORFIP (100% identity) | C.BdoB079IP | |
| 20000 | 122 aa hypothetical protein | |||