Bacteroides dorei CL02T12C06 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Bacteroides dorei CL02T12C06 RM systems
Ref: Earl,A. et al. unpublished
REBASE ref # 18084
Contig set: 5,997,311 bp
GenBank #: AGXJ00000000 (NZ_AGXJ00000000)
REBASE acronym: Bdo12C06
Org_num: 13636
All begin HMPREF1064_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 168 | S | S1.Bov145ORF1445P (47% identity) | S.Bdo12C06ORF170P | |
| 169 | 468 aa hypothetical protein | |||
| 170 | M | M.Bov224ORF13445P (98% identity) | M.Bdo12C06ORF170P | |
| 171 | 666 aa hypothetical protein | |||
| 172 | R | Bov224ORF13445P (100% identity) | Bdo12C06ORF170P | |
| 173 | 93 aa hypothetical protein | |||
| 5182 | S | S4.Bov224ORF13445P (54% identity) | S1.Bdo12C06ORF5182P | |
| 5183 | S | S3.Bov224ORF13445P (84% identity) | S2.Bdo12C06ORF5182P | |
| 5184 | 226 aa hypothetical protein | |||
| 5185 | S | S1.Bov224ORF13445P (48% identity) | S3.Bdo12C06ORF5182P | |
| 4131 | 503 aa hypothetical protein | |||
| 4132 | S | S1.Msa17ORFJ1P (61% identity) | S.Bdo12C06ORF4132P | |
| 4133 | 308 aa hypothetical protein | |||
| 2360 | 156 aa hypothetical protein | |||
| 2361 | S | S1.BspM10CORF13105P (47% identity) | S1.Bdo12C06ORF2361P | |
| 2362 | 267 aa hypothetical protein | |||
| ??? | S | S4.Pdo17855ORF22875P (100% identity) | S2.Bdo12C06ORF2361P | |
| 2364 | S | S2.PvuC06ORF3690P (36% identity) | S3.Bdo12C06ORF2361P | |
| 4366 | 440 aa hypothetical protein | |||
| 4367 | M | M.PmeBin22ORFCP (99% identity) | M.Bdo12C06ORF4367P | |
| 4368 | S-adenosylmethionine:tRNA | |||
| 4111 | 99 aa hypothetical protein | |||
| 4112 | R | Bno12C05ORF7P (100% identity) | Bdo12C06ORF4115P | |
| 4113 | 219 aa hypothetical protein | |||
| 4114 | 251 aa hypothetical protein | |||
| 4115 | M | M.Bno12C05ORF7P (100% identity) | M.Bdo12C06ORF4115P | |
| 4116 | 703 aa hypothetical protein | |||
| 4117 | 350 aa hypothetical protein | |||
| 4118 | S | S1.AfiCE91ORF22430P (61% identity) | S.Bdo12C06ORF4115P | |
| 4119 | 59 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3904 | 317 aa hypothetical protein | |||
| 3905 | R | PmeBin10ORFCP (100% identity) | Bdo12C06ORF3907P | |
| 3906 | 513 aa hypothetical protein | |||
| 3907 | M | M.PmeBin10ORFCP (48% identity) | M1.Bdo12C06ORF3907P | |
| 3908 | 353 aa hypothetical protein | |||
| 3909 | M | M.PmeBin10ORFCP (43% identity) | M2.Bdo12C06ORF3907P | |
| 3910 | C | C.PdiGP102ORF19345P (100% identity) | C.Bdo12C06ORF3907P | |
| 3911 | 183 aa hypothetical protein | |||
| 869 | 959 aa hypothetical protein | |||
| 870 | RM | PmeBin11ORFCP (78% identity) | Bdo12C06ORF870P | |
| 871 | 346 aa hypothetical protein | |||
| 2767 | 139 aa hypothetical protein | |||
| 2768 | M | M.Pvu191ORF10140P (86% identity) | M.Bdo12C06ORF2768P | |
| 2769 | 178 aa hypothetical protein | |||
| 273 | 35 aa hypothetical protein | |||
| 274 | M | M.Uph2207ORFAP (100% identity) | M.Bdo12C06ORF274P | |
| 275 | 212 aa hypothetical protein | |||
| 3149 | 128 aa hypothetical protein | |||
| 3150 | M | M.Pvu3C24ORF2192P (99% identity) | M.Bdo12C06ORF3150P | |
| 3151 | 78 aa hypothetical protein | |||
| 3466 | 117 aa hypothetical protein | |||
| 3467 | M | M.Bth266ORF14485P (100% identity) | CTSAG | M.Bdo12C06ORF3467P |
| 3468 | conjugative transposon TraN protein | |||
| 2938 | 256 aa hypothetical protein | |||
| 2939 | M | M.PvuC06ORF1788P (100% identity) | M.Bdo12C06ORF2939P | |
| 2940 | 40 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4115 | type I restriction-modification system, M | |||
| 4116 | R | Bno12C05GmrSDP (100% identity) | Bdo12C06GmrSDP | |
| 4117 | 350 aa hypothetical protein | |||