Bacteroides caccae CL03T12C61 |
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Putative Bacteroides caccae CL03T12C61 RM systems
Ref: Earl,A. et al. unpublished
REBASE ref # 18084
Contig set: 5,479,119 bp
GenBank #: AGXF00000000 (NZ_AGXF00000000)
REBASE acronym: Bca12C61
Org_num: 13635
All begin HMPREF1061_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3332 | 467 aa hypothetical protein | |||
| 3333 | C | C.Bov465ORF2740P (100% identity) | C.Bca12C61ORF3335P | |
| 3334 | R | Bov465ORF2740P (100% identity) | Bca12C61ORF3335P | |
| 3335 | M | M.Bov465ORF2740P (100% identity) | M.Bca12C61ORF3335P | |
| 3336 | 382 aa hypothetical protein | |||
| 3337 | 136 aa hypothetical protein | |||
| 3338 | S | S1.BcaC61ORF808P (100% identity) | S1.Bca12C61ORF3335P | |
| 3339 | S | S2.BcaC61ORF808P (100% identity) | S2.Bca12C61ORF3335P | |
| 3340 | 330 aa hypothetical protein | |||
| 3341 | S | S.BcaC61ORF802P (100% identity) | S3.Bca12C61ORF3335P | |
| 3343 | 372 aa hypothetical protein | |||
| 309 | 268 aa hypothetical protein | |||
| 310 | S | S4.BcaC61ORF1816P (100% identity) | S1.Bca12C61ORF316P | |
| 311 | S | S3.BcaC61ORF1816P (100% identity) | S2.Bca12C61ORF316P | |
| 312 | S | S2.BcaC61ORF1816P (100% identity) | S3.Bca12C61ORF316P | |
| 313 | 522 aa hypothetical protein | |||
| 314 | 168 aa hypothetical protein | |||
| 315 | 341 aa hypothetical protein | |||
| 316 | M | M.BcaC61ORF1816P (100% identity) | M.Bca12C61ORF316P | |
| 317 | R | BcaC61ORF1816P (100% identity) | Bca12C61ORF316P | |
| 318 | 68 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 983 | RM | BcaC61ORF2467P (76% identity) | Bca12C61ORF983P | |
| 984 | 39 aa hypothetical protein | |||
| 1988 | 77 aa hypothetical protein | |||
| 1989 | M | M.BcaC61ORF3464P (100% identity) | M.Bca12C61ORF1989P | |
| 1990 | 556 aa hypothetical protein | |||
| 562 | 569 aa hypothetical protein | |||
| ??? | M | M.Bxy514ORF13035P (100% identity) | M.Bca12C61ORFAP | |
| 566 | 248 aa hypothetical protein | |||
| 3274 | 37 aa hypothetical protein | |||
| 3275 | M | M.Msa17ORFHP (100% identity) | GAATTC | M.Bca12C61ORF3275P |
| 3276 | 283 aa hypothetical protein | |||
| 2159 | 314 aa hypothetical protein | |||
| 2160 | R | PmeBin35ORFAP (100% identity) | CCATC | Bca12C61ORF2161P |
| 2161 | M | M2.PmeBin35ORFAP (100% identity) | CCATC | M2.Bca12C61ORF2161P |
| 2162 | M | M1.PmeBin35ORFAP (100% identity) | CCATC | M1.Bca12C61ORF2161P |
| 2163 | carbamoyl-phosphate synthase, large subunit | |||
| 298 | 310 aa hypothetical protein | |||
| 299 | M | M.Pdi426ORF3965P (100% identity) | CTGCAG | M.Bca12C61ORF299P |
| 300 | C | C.Bth7330ORF3470P (100% identity) | C.Bca12C61ORF299P | |
| 301 | 389 aa hypothetical protein | |||
| 326 | conjugative transposon TraM protein | |||
| 327 | M | M.PmeBin647ORFBP (100% identity) | CTSAG | M.Bca12C61ORF327P |
| 328 | conjugative transposon TraN protein | |||
| 3843 | 410 aa hypothetical protein | |||
| 3844 | M | M2.BcaC61ORF1057P (100% identity) | GATC | M1.Bca12C61ORF3844P |
| 3845 | R | BcaC61ORF1057P (100% identity) | GATC | Bca12C61ORF3844P |
| 3846 | M | M1.BcaC61ORF1057P (100% identity) | GATC | M2.Bca12C61ORF3844P |
| 3847 | metalloprotein, YbeY/UPF0054family | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1584 | 983 aa hypothetical protein | |||
| 1585 | R | BcaC61ORF3061P (100% identity) | Bca12C61ORF1587P | |
| 1586 | 335 aa hypothetical protein | |||
| 1587 | M | M.BcaC61ORF3061P (100% identity) | M.Bca12C61ORF1587P | |
| 1588 | 225 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 814 | 144 aa hypothetical protein | |||
| 815 | R | PmeBin96McrBP (100% identity) | Bca12C61McrBP | |
| 816 | R | PmeBin96McrCP (100% identity) | Bca12C61McrCP | |
| 817 | 235 aa hypothetical protein | |||