Haemophilus parasuis KL0318 |
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Putative Haemophilus parasuis KL0318 RM systems
Ref: Li,P. et al. unpublished
REBASE ref # 18092
Complete sequence: 2,280,878 bp
GenBank #: CP009237
REBASE acronym: Hpa318
Org_num: 13626
All begin JT17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1840 | aspartate aminotransferase | |||
| 1845 | R | Hpa174ORF186P (99% identity) | Hpa318ORF1860P | |
| 1855 | S | S.Hpa1401ORF175P (81% identity) | S.Hpa318ORF1860P | |
| 1860 | M | M.HpaNNORF6450P (99% identity) | M.Hpa318ORF1860P | |
| 1865 | MFS transporter | |||
| 7135 | 16S rRNA methyltransferase | |||
| 7140 | M | M.HpaST41ORF7145P (100% identity) | M.Hpa318ORF7140P | |
| 7145 | 163 aa hypothetical protein | |||
| 7150 | 392 aa hypothetical protein | |||
| 7155 | R | HpaNagORF1654P (99% identity) | Hpa318ORF7140P | |
| ??? | S | S.HpaNNII (99% identity) | S.Hpa318ORF7140P | |
| 7165 | tRNA uridine 5-carboxymethylaminomethyl | |||
| 8250 | 92 aa hypothetical protein | |||
| 8255 | R | HpaD74ORF753P (98% identity) | Hpa318ORF8280P | |
| 8260 | prophage protein | |||
| 8265 | 254 aa hypothetical protein | |||
| 8270 | S | S2.Hpa15995ORF1730P (52% identity) | S.Hpa318ORF8280P | |
| 8275 | pseudogene | |||
| 8280 | M | M.GpaHPS7ORF1390P (99% identity) | M.Hpa318ORF8280P | |
| 8290 | 137 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2305 | 199 aa hypothetical protein | |||
| 2310 | M | M.HpaNagORF227P (100% identity) | CCGG | M.Hpa318ORF2310P |
| 2315 | condesin subunit E | |||
| 3725 | 3-dehydroquinate synthase | |||
| 3730 | M | M.HpaSW114ORF1907P (99% identity) | GATC | M.Hpa318ORF3730P |
| 3735 | pseudogene | |||
| 4585 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate | |||
| 4590 | M | M.HpaST41ORF8905P (100% identity) | CGCG | M.Hpa318ORF4590P |
| 4595 | R | HpaST41ORF8905P (100% identity) | CGCG | Hpa318ORF4590P |
| 4600 | lactate dehydrogenase | |||
| 5500 | 134 aa hypothetical protein | |||
| ??? | M | Hpa906ORF8990P (100% identity) | M1.Hpa318ORF5510P | |
| 5510 | M | M2.HpaSH03ORF7930P (100% identity) | M2.Hpa318ORF5510P | |
| 5515 | RM | HpaSH03ORF7930P (100% identity) | Hpa318ORF5510P | |
| 5520 | twitching motility protein PilT | |||
| 5655 | pseudogene | |||
| 5665 | M | M.HpaNNORFNP (87% identity) | M.Hpa318ORF5665P | |
| 5675 | enoyl-CoA hydratase | |||
| 5985 | valine--tRNA ligase | |||
| ??? | M | M.HpaSH03ORF8550P (100% identity) | AAGCTT | M.Hpa318ORF5990P |
| 5995 | R | HpaSHORF1983P (99% identity) | AAGCTT | Hpa318ORF5990P |
| 6000 | 197 aa hypothetical protein | |||
| 10540 | aspartate-semialdehyde dehydrogenase | |||
| 10545 | M | HpaNagORF863P (99% identity) | M.Hpa318ORF10545P | |
| 10550 | pseudogene | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4365 | pseudogene | |||
| 4370 | M | M.Hpa33ORFAP (97% identity) | M.Hpa318ORF4370P | |
| 4375 | R | Gpa412ORF2655P (99% identity) | Hpa318ORF4370P | |
| 4380 | 3-oxoacyl-ACP synthase | |||
| 6265 | XRE family transcriptional regulator | |||
| 6275 | M | M.HpaST41ORF1100P (100% identity) | M.Hpa318ORF6275P | |
| 6280 | R | GpaXP11ORF7230P (99% identity) | Hpa318ORF6275P | |
| 6285 | transposase | |||
| 8540 | ketol-acid reductoisomerase | |||
| ??? | M | M2.Hpa29755ORF875P (98% identity) | M.Hpa318ORFAP | |
| 8545 | Uncharacterized protein | |||
| ??? | Uncharacterized protein | |||
| 8545 | M | M.HpaSH03ORF10740P (88% identity) | M.Hpa318ORF8545P | |
| 8550 | R | Gpa104ORFHP (97% identity) | Hpa318ORF8545P | |
| 8555 | addiction module protein | |||