Escherichia coli O128:H2 2011C-3317 |
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Putative Escherichia coli O128:H2 2011C-3317 RM systems
Ref: Lindsey,R. et al. unpublished
REBASE ref # 18018
GenBank #: JASU00000000
REBASE acronym: Eco3317
Org_num: 13586
All begin BU64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3635 | 161 aa hypothetical protein | |||
| 3640 | M | M.EcoHs3III (100% identity) | TWCANNNNNNTGG | M.Eco3317I |
| 3645 | S | S.EcoHs3III (100% identity) | TWCANNNNNNTGG | S.Eco3317I |
| 3650 | R | EcoHs3IIIP (99% identity) | TWCANNNNNNTGG | Eco3317IP |
| 3665 | lactate utilization protein B/C | |||
| 6180 | restriction endonuclease | |||
| 6190 | M | M.EcoSTEC866ORF20040P (100% identity) | M.Eco3317ORF6190P | |
| 6195 | restriction endonuclease | |||
| 6190 | restriction endonuclease subunit M | |||
| 6195 | S | S.EcoBU11ORF9605P (100% identity) | CCAYNNNNNTGT | S.Eco3317II |
| 6200 | membrane protein | |||
| 24335 | 483 aa hypothetical protein | |||
| 24350 | S | S.EcoZ147ORF19115P (100% identity) | S.Eco3317ORF24355P | |
| 24355 | M | M.EcoNT1W25ORFFP (100% identity) | M.Eco3317ORF24355P | |
| 24365 | transposase | |||
| 24365 | transposase | |||
| 24375 | R | EcoW1316ORF930P (98% identity) | Eco3317ORF24390P | |
| 24385 | S | S.Eco1317ORF6510P (68% identity) | S.Eco3317ORF24390P | |
| 24390 | M | M.Eco11229ORFHP (91% identity) | M.Eco3317ORF24390P | |
| 24395 | 290 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30205 | 73 aa hypothetical protein | |||
| 30210 | M | M.EcoSTEC636ORF25980P (100% identity) | SAY | M.Eco3317ORF30170P |
| 30220 | 61 aa hypothetical protein | |||
| 33910 | hydrolase | |||
| 33915 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco3317Dcm |
| 33920 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco3317DcmP |
| 33925 | multidrug DMT transporter | |||
| 31230 | 70 aa hypothetical protein | |||
| 31260 | M | M.EcoGE3ORF1212P (99% identity) | M.Eco3317ORF31260P | |
| 31265 | 94 aa hypothetical protein | |||
| 1680 | cruciferin | |||
| 1685 | M | M.Sbo812ORFAP (100% identity) | GATC | M.Eco3317ORF1685P |
| 1695 | 71 aa hypothetical protein | |||
| 3710 | membrane protein | |||
| 3715 | M | M.KpnFF77ORF20840P (100% identity) | GTAC | M.Eco3317ORF3715P |
| 3720 | 402 aa hypothetical protein | |||
| 6160 | HNH endonuclease | |||
| 6170 | R | EcosB2CORFAP (100% identity) | Eco3317ORF6170P | |
| 6175 | restriction endonuclease | |||
| 14225 | cell division protein DamX | |||
| 14235 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco3317DamP |
| 14240 | ribulose-phosphate 3-epimerase | |||
| 14845 | 59 aa hypothetical protein | |||
| 14850 | M | M.EcoVL08ORF22070P (100% identity) | ATGCAT | M.Eco3317ORF14850P |
| 14855 | Fis family transcriptional regulator | |||
| 23005 | 65 aa hypothetical protein | |||
| 23015 | M | M.EcoAVFP2ORFAP (99% identity) | M.Eco3317ORF23015P | |
| 23035 | Shiga toxin subunit A | |||
| 23510 | 70 aa hypothetical protein | |||
| 23515 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco3317ORF23515P |
| 23520 | regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 29470 | TrbC | |||
| 29475 | R | Eco1585ORF26070P (100% identity) | Eco3317ORF29480P | |
| 29480 | M | M.EcoC0186ORF25185P (100% identity) | M.Eco3317ORF29480P | |
| 29485 | 189 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6170 | restriction endonuclease | |||
| 6175 | R | SflN101McrBP (100% identity) | Eco3317McrBP | |
| 6180 | R | EcoSO63McrCP (100% identity) | Eco3317McrCP | |
| 6190 | restriction endonuclease subunit M | |||