Escherichia coli O146:H21 2010C-3325 |
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Putative Escherichia coli O146:H21 2010C-3325 RM systems
Ref: Lindsey,R. et al. unpublished
REBASE ref # 18018
GenBank #: JASR00000000
REBASE acronym: Eco3325
Org_num: 13583
All begin BU55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12000 | alcohol dehydrogenase | |||
| 12020 | R | EcoP231ORF1540P (100% identity) | RTCANNNNNNCTC | Eco3325IP |
| 12030 | S | S.EcoSCU103ORF3030P (100% identity) | RTCANNNNNNCTC | S.Eco3325I |
| 12035 | M | M.EcoS40ORF24345P (100% identity) | RTCANNNNNNCTC | M.Eco3325I |
| 12040 | 62 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25945 | multidrug DMT transporter | |||
| 25950 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco3325DcmP |
| 25955 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco3325Dcm |
| 25960 | hydrolase | |||
| 26305 | Shiga toxin subunit A | |||
| 26325 | M | M.Eco7190ORF10650P (100% identity) | M.Eco3325ORF26325P | |
| 26335 | 65 aa hypothetical protein | |||
| 1435 | 311 aa hypothetical protein | |||
| 1455 | M | M.EcoBU11ORF2080P (100% identity) | A | M.Eco3325ORF1455P |
| 1465 | 65 aa hypothetical protein | |||
| 2610 | LexA family transcriptional regulator | |||
| 2615 | M | M.Ecos32ORF15890P (100% identity) | GATC | M.Eco3325ORF2615P |
| 2620 | 162 aa hypothetical protein | |||
| 28305 | 68 aa hypothetical protein | |||
| ??? | S | S2.Eco1317ORFAP (47% identity) | S.Eco3325ORF28315P | |
| 28315 | RM | Eco955ORF8695P (100% identity) | Eco3325ORF28315P | |
| 28325 | membrane protein | |||
| 30460 | transcriptional regulator | |||
| 30465 | M | M.EfeC23ORF6940P (99% identity) | GATC | M.Eco3325ORF30465P |
| 30470 | 64 aa hypothetical protein | |||
| 12060 | mcrBC 5-methylcytosine restriction system | |||
| 12065 | R | EcoWCTORF19980P (100% identity) | Eco3325ORF12065P | |
| 12080 | HNH endonuclease | |||
| 12685 | 162 aa hypothetical protein | |||
| 12690 | M | M.EcosA33ORF3820P (100% identity) | GATC | M.Eco3325ORF12690P |
| 12695 | LexA family transcriptional regulator | |||
| 13505 | holin | |||
| 13510 | M | M.Ecos154ORF3516P (76% identity) | M.Eco3325ORF13510P | |
| 13520 | 112 aa hypothetical protein | |||
| 21055 | cell division protein DamX | |||
| 21065 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco3325DamP |
| 21070 | ribulose-phosphate 3-epimerase | |||
| 21675 | 59 aa hypothetical protein | |||
| 21680 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco3325ORF21680P |
| 21685 | Fis family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2380 | isocitrate dehydrogenase | |||
| 2385 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco3325ORF2385P |
| 2390 | DNA-invertase | |||
| 12050 | transposase | |||
| 12055 | R | SflSTLE4McrBP (100% identity) | Eco3325McrBP | |
| 12060 | R | EcoZ151McrCP (100% identity) | Eco3325McrCP | |
| 12065 | restriction endonuclease | |||