Edwardsiella tarda 080813 |
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Putative Edwardsiella tarda 080813 RM systems
Ref: Yang,M. et al. PLoS ONE 7 (5), E36987 (2012)
REBASE ref # 18065
| Sequence length: | GenBank #: | |
| Chromosome: | 4,200,387 bp | CP006664 |
| plasmid 1: | 127,046 bp | CP006665 |
REBASE acronym: Eta80813
Org_num: 13521
All begin ETEE_, ETEE_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4074 | 3-ketoacyl-CoA thiolase | |||
| 4075 | M | M.Esp105ORF10255P (100% identity) | M.Eta80813ORF4075P | |
| 4076 | S | S.Esp105ORF10255P (100% identity) | S.Eta80813ORF4075P | |
| 4077 | R | Esp105ORF10255P (100% identity) | Eta80813ORF4075P | |
| 4078 | GTPase subunit of restriction endonuclease-like | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 533 | Holliday junction resolvase / Crossover junction | |||
| ??? | M | M.Esp105ORFAP (100% identity) | GATC | M.Eta80813ORF534P |
| 536 | 80 aa Hypothetical protein | |||
| 862 | Holliday junction resolvase / Crossover junction | |||
| 863 | M | M.EanC51ORF4915P (100% identity) | GATC | M.Eta80813ORF863P |
| 864 | DNA replication protein P, putative | |||
| 1485 | Ribulose-phosphate 3-epimerase | |||
| 1486 | M | M.Esp105Dam2P (100% identity) | GATC | M.Eta80813DamP |
| 1487 | DamX, an inner membrane protein involved in bile | |||
| 2575 | 39 aa Hypothetical protein | |||
| 2576 | R | EanC51ORF4635P (100% identity) | Eta80813ORF2578P | |
| 2577 | 85 aa Hypothetical protein | |||
| 2578 | M | M.Ahy187ORFCP (97% identity) | CCWGG | M.Eta80813ORF2578P |
| 2579 | 48 aa Hypothetical protein | |||
| plasmid 1 | ||||
| 1106 | 38 aa Hypothetical protein | |||
| 1107 | M | M.Epi199ORF18760P (100% identity) | CCNGG | M.Eta80813ORF1107P |
| 1108 | 5-nucleotidase yfbR | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4077 | Type I restriction-modification system, | |||
| 4078 | R | EanC51McrBP (100% identity) | Eta80813McrBP | |
| 4079 | R | Esp105McrCP (100% identity) | Eta80813McrCP | |
| 4080 | 48 aa Hypothetical protein | |||