Deinococcus species RL |
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Putative Deinococcus species RL RM systems
Ref: Mahato,N.K. et al. Genome Announc 2 (4), e00703-14 (2014)
REBASE ref # 17986
GenBank #: JMQF00000000
REBASE acronym: DspRL
Org_num: 13496
All begin RDMS_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4835 | 130 aa hypothetical protein | |||
| 4840 | R | Dsp1210ORF8810P (80% identity) | DspRLORF4855P | |
| 4845 | 967 aa hypothetical protein | |||
| 4850 | S | S.PaeF002ORF20590P (39% identity) | S.DspRLORF4855P | |
| 4855 | M | M.DspNW56ORFCP (90% identity) | M.DspRLORF4855P | |
| 4860 | 101 aa hypothetical protein | |||
| 12760 | 712 aa hypothetical protein | |||
| 12765 | M | M.Dra27603ORF20P (75% identity) | M.DspRLORF12765P | |
| 12770 | 63 aa hypothetical protein | |||
| 12785 | 364 aa hypothetical protein | |||
| 12790 | R | Dsp1483ORF11045P (75% identity) | DspRLORF12790P | |
| 12805 | 646 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6250 | M | M1.SwoGORF503P (46% identity) | M.DspRLORF6250P | |
| 6255 | histidinol-phosphate aminotransferase | |||
| 4340 | pseudogene | |||
| 4345 | M | M.DspAJ005ORF17730P (83% identity) | M.DspRLORF4345P | |
| 4350 | DeoR faimly transcriptional regulator | |||
| 50 | 231 aa hypothetical protein | |||
| 60 | RM | DspVB142ORF7455P (75% identity) | DspRLORF60P | |
| 65 | dehydrogenase | |||
| 4365 | carboxypeptidase | |||
| ??? | M | M.Gsp7407ORF1095P (52% identity) | GATC | M.DspRLORFAP |
| 4370 | 128 aa hypothetical protein | |||
| 10970 | 3-ketoacyl-ACP reductase | |||
| 10975 | RM | Dra27603ORF13350P (78% identity) | DspRLORF10975P | |
| 10980 | mannonate oxidoreductase | |||
| 1765 | 61 aa hypothetical protein | |||
| 1780 | M | M.Pla10367ORF24875P (55% identity) | M.DspRLORF1780P | |
| 1785 | 212 aa hypothetical protein | |||
| 6640 | N-carbamoylputrescine amidase | |||
| 6645 | RM | DrdII (66% identity) | DspRLORF6645P | |
| 6650 | pseudouridine synthase | |||
| 11075 | NADH-quinone oxidoreductase subunit N | |||
| 11080 | RM | Rsp52915ORF17850P (83% identity) | DspRLORF11080P | |
| 11085 | M | M2.Rsp52915ORF17850P (80% identity) | M1.DspRLORF11080P | |
| 11090 | M | DgeDORF924CP (93% identity) | M2.DspRLORF11080P | |
| 11095 | diguanylate cyclase | |||
| 7255 | 142 aa hypothetical protein | |||
| 7260 | RM | DspD7000ORF8985P (52% identity) | DspRLORF7260P | |
| 7265 | ATP-dependent helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7225 | sugar ABC transporter permease | |||
| 7230 | R | DraRMcrCP (69% identity) | DspRLMcrCP | |
| 7235 | R | DraRMcrBP (56% identity) | DspRLMcrBP | |
| 7240 | 674 aa hypothetical protein | |||
| 12770 | 63 aa hypothetical protein | |||
| 12775 | R | Dae125MrrP (86% identity) | DspRLMrrP | |
| 12780 | 101 aa hypothetical protein | |||