Riemerella anatipestifer CH3 |
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Putative Riemerella anatipestifer CH3 RM systems
Ref: Yu,S. et al. unpublished
REBASE ref # 19185
Complete sequence: 2,234,477 bp
GenBank #: CP006649
REBASE acronym: RanCH3
Org_num: 13440
All begin M949_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 552 | endonuclease/exonuclease/phosphatase | |||
| 553 | R | RanXG19ORF2460P (100% identity) | RanCH3ORF557P | |
| 554 | DNA-damage-inducible protein D | |||
| 555 | 158 aa hypothetical protein | |||
| 556 | S | S.RanXG19ORF2460P (100% identity) | S.RanCH3ORF557P | |
| ??? | M | M.RanXG19ORF2460P (99% identity) | M.RanCH3ORF557P | |
| 559 | 42 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 162 | 224 aa hypothetical protein | |||
| 163 | M | M.RanYb2ORF3435P (96% identity) | BA | M.RanCH3ORF163P |
| 164 | 54 aa hypothetical protein | |||
| 420 | 82 aa hypothetical protein | |||
| 421 | M | M.RanXG19ORF3100P (100% identity) | M.RanCH3ORF421P | |
| 422 | R | RanXG19ORF3100P (100% identity) | GTMKAC | RanCH3ORF421P |
| 423 | 325 aa hypothetical protein | |||
| 439 | 38 aa hypothetical protein | |||
| 440 | M | M2.RanXG19ORF3010P (100% identity) | GATC | M1.RanCH3ORF440P |
| 441 | R | RanYb2ORF9770P (100% identity) | GATC | RanCH3ORF440P |
| ??? | M | M2.Ran1ORF11P (100% identity) | GATC | M2.RanCH3ORF440P |
| 443 | 74 aa hypothetical protein | |||
| 848 | 285 aa hypothetical protein | |||
| 849 | M | M.RanYMORF7420P (100% identity) | GAATTC | M.RanCH3ORF849P |
| 850 | R | RanYMORF7420P (100% identity) | GAATTC | RanCH3ORF849P |
| 851 | 162 aa hypothetical protein | |||
| 1659 | delta-1-pyrroline-5-carboxylate dehydrogenase | |||
| 1660 | M | M.RanXG19ORF8330P (100% identity) | CATG | M1.RanCH3ORF1660P |
| 1661 | R | RanWJ4ORF4210P (100% identity) | CATG | RanCH3ORF1660P |
| ??? | M | M.RanXG19ORF8320P (98% identity) | CATG | M2.RanCH3ORF1660P |
| 1664 | xaa-pro aminopeptidase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 212 | helicase domain-containing protein | |||
| ??? | R | RanWJ4ORF525P (100% identity) | RanCH3ORF215P | |
| 215 | M | M.RanWJ4ORF525P (100% identity) | M.RanCH3ORF215P | |
| 216 | tRNA modification GTPase TrmE | |||