Flavobacterium psychrophilum V4-28 |
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Putative Flavobacterium psychrophilum V4-28 RM systems
Ref: Castillo,D. Sr. et al. unpublished
REBASE ref # 17921
Complete sequence: 2,697,393 bp
GenBank #: CP008882
REBASE acronym: FpsV428
Org_num: 13411
All begin IA05_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 65 | succinyl-CoA:3-ketoacid-CoA transferase | |||
| 70 | RM | FpsVQ50ORF135P (100% identity) | FpsV428ORF70P | |
| 75 | 206 aa hypothetical protein | |||
| 1130 | damage-inducible protein D | |||
| 1135 | RM | FpsVQ50ORF1235P (100% identity) | FpsV428ORF1135P | |
| 1140 | D-tyrosyl-tRNA(Tyr) deacylase | |||
| 3680 | RNA methyltransferase | |||
| 3685 | C | C.FpsVQ50ORF3755P (100% identity) | C.FpsV428ORF3690P | |
| 3690 | M | M.FpsVQ50ORF3755P (100% identity) | GATC | M.FpsV428ORF3690P |
| 3695 | 208 aa hypothetical protein | |||
| 3995 | histidine kinase | |||
| 4000 | C | C.FpsVQ50ORF4080P (100% identity) | C.FpsV428ORF4005P | |
| 4005 | M | M.FpsVQ50ORF4080P (100% identity) | CGCG | M.FpsV428ORF4005P |
| 4010 | R | FpsVQ50ORF4080P (100% identity) | CGCG | FpsV428ORF4005P |
| 4015 | selenocysteine lyase | |||
| 7545 | 146 aa hypothetical protein | |||
| 7550 | M | M.FpsVQ50ORF7630P (100% identity) | CTGAAG | M.FpsV428ORF7550P |
| 7555 | RM | FpsVQ50ORF7630P (100% identity) | CTGAAG | FpsV428ORF7550P |
| 7560 | C | C.FpsVQ50ORF7630P (100% identity) | C.FpsV428ORF7550P | |
| 7565 | 214 aa hypothetical protein | |||
| 9650 | 129 aa hypothetical protein | |||
| 9655 | RM | FpsV433ORF9590P (100% identity) | FpsV428ORF9655P | |
| 9660 | 190 aa hypothetical protein | |||
| 10580 | restriction endonuclease | |||
| 10585 | R | FpsVQ50ORF10495P (100% identity) | CCNGG | FpsV428ORF10590P |
| 10590 | M | M.FpsV433ORF10530P (100% identity) | CCNGG | M.FpsV428ORF10590P |
| 10595 | 241 aa hypothetical protein | |||
| 11235 | multidrug ABC transporter ATPase | |||
| 11240 | R | FpsVQ50ORF11250P (100% identity) | CCGG | FpsV428ORF11245P |
| 11245 | M | M.FpsVQ50ORF11250P (100% identity) | CCGG | M.FpsV428ORF11245P |
| 11250 | peptidase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10700 | 980 aa hypothetical protein | |||
| 10705 | R | FpsVQ50ORF10650P (100% identity) | CGCAG | FpsV428ORF10715P |
| 10710 | toxin Fic | |||
| 10715 | M | M.FpsVQ50ORF10650P (100% identity) | CGCAG | M.FpsV428ORF10715P |
| 10720 | 702 aa hypothetical protein | |||