Vibrio cholerae O1 biovar El Tor L-3226 |
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Putative Vibrio cholerae O1 biovar El Tor L-3226 RM systems
Ref: Smirnova,N.I. et al. Genome Announc 2 (3), e00432-14 (2014)
REBASE ref # 17873
GenBank #: JDVX00000000
REBASE acronym: VchL3226
Org_num: 13301
All begin AZ32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9725 | pseudogene | |||
| 9730 | M | M.VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | M.VchL3226ORF9730P |
| 9735 | S | S.VspNIH41ORF1746P (99% identity) | AAGNNNNNNCATC | S.VchL3226ORF9730P |
| 9740 | pseudogene | |||
| 9745 | pseudogene | |||
| 9750 | R | VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | VchL3226ORF9730P |
| 9755 | pseudogene | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21125 | hemagglutinin | |||
| 21130 | M | M.VspNIH41ORF3529P (94% identity) | M.VchL3226ORF21130P | |
| 10355 | 1151 aa hypothetical protein | |||
| ??? | RM | VchPC1ORF10795P (99% identity) | VchL3226ORF10360P | |
| 10365 | alkaline phosphatase | |||
| 20030 | guanosine 5-monophosphate oxidoreductase | |||
| ??? | M | M.VspNIH41ORF700P (100% identity) | RCCGGY | M.VchL3226ORF20040P |
| 20045 | pseudogene | |||
| 5425 | ribulose-phosphate 3-epimerase | |||
| 5430 | M | M.VspNIH41DamP (100% identity) | GATC | M.VchL3226DamP |
| 5435 | cell division protein DamX | |||