Escherichia coli O25b-ST131 |
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Putative Escherichia coli O25b-ST131 RM systems
Ref: Kutumbaka,K.K. et al. Genome Announc 2 (3), e00462-14 (2014)
REBASE ref # 17872
GenBank #: JJNV00000000
REBASE acronym: EcoST131
Org_num: 13356
All begin DP79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24640 | antitoxin | |||
| ??? | M | M.SenceORFJP (100% identity) | CAAYNNNNNCTGG | M.EcoST131ORF24645P |
| 24650 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.EcoST131ORF24645P |
| 24655 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNCTGG | EcoST131ORF24645P |
| 24660 | transposase | |||
| 12800 | endoribonuclease SymE | |||
| 12805 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoST131ORF12815P |
| 12810 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoST131ORF12815P |
| 12815 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoST131ORF12815P |
| 12820 | restriction endonuclease | |||
| 9535 | 260 aa hypothetical protein | |||
| 9540 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoST131ORF9545P |
| 9545 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoST131ORF9545P |
| 9550 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoST131ORF9545P |
| 9555 | 156 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4475 | hydrolase | |||
| 4480 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoST131DcmP |
| 4485 | V | V.SflC32DcmP (74% identity) | V.EcoST131DcmP | |
| 4490 | multidrug DMT transporter | |||
| 25720 | restriction endonuclease | |||
| 25725 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoST131ORF25730P |
| 25730 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoST131ORF25730P |
| 25735 | M | M1.EcosS9ORF2810P (95% identity) | GGTCTC | M2.EcoST131ORF25730P |
| 8950 | 92 aa hypothetical protein | |||
| 8965 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoST131ORF8965P |
| 8970 | 65 aa hypothetical protein | |||
| 20005 | 308 aa hypothetical protein | |||
| 20010 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoST131ORF20010P |
| 20015 | 73 aa hypothetical protein | |||
| 16010 | antitermination protein | |||
| 16015 | M | M.EcoSHP24ORF23700P (100% identity) | GTCGAC | M.EcoST131ORF16015P |
| 16020 | 229 aa hypothetical protein | |||
| 16030 | 64 aa hypothetical protein | |||
| 16035 | M | M.Sso63633ORF22290P (100% identity) | M.EcoST131ORF16035P | |
| 16040 | holin | |||
| 12115 | 71 aa hypothetical protein | |||
| 12120 | M | M.KpnYN1ORFGP (89% identity) | M.EcoST131ORF12120P | |
| 12125 | DNA-binding protein | |||
| 215 | ribulose-phosphate 3-epimerase | |||
| 220 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoST131DamP |
| 225 | cell division protein DamX | |||
| 8845 | Fis family transcriptional regulator | |||
| 8850 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoST131ORF8850P |
| 8855 | 59 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25710 | glycosyl transferase | |||
| 25715 | R | EcosS3McrBP (100% identity) | EcoST131McrBP | |
| 25720 | R | EcosS9McrCP (100% identity) | EcoST131McrCP | |
| 25725 | restriction endonuclease | |||