Pseudomonas aeruginosa DHS01 |
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Putative Pseudomonas aeruginosa DHS01 RM systems
Ref: Valot,B. et al. Genome Announc 2 (3), e00515-14 (2014)
REBASE ref # 17861
| Sequence length: | GenBank #: | |
| Chromosome: | 7,055,752 bp | CP013993 |
| Chromosome: | 6,953,788 bp | AYNE00000000 (NZ_AYNE00000000) |
REBASE acronym: PaeDHS01
Org_num: 13291
All begin DPADHS01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13045 | integrase | |||
| 13050 | R | PaeRN21ORF2494P (100% identity) | PaeDHS01ORF15730P | |
| 13055 | S | S.PspAK6UORFGP (100% identity) | S.PaeDHS01ORF15730P | |
| 13060 | chromosome segregation protein SMC | |||
| 13065 | 105 aa hypothetical protein | |||
| 13070 | M | M.PspAK6UORFGP (100% identity) | M.PaeDHS01ORF15730P | |
| 13075 | restriction endonuclease | |||
| Chromosome | ||||
| 15725 | restriction endonuclease | |||
| 15730 | M | M.PspAK6UORFGP (100% identity) | M.PaeDHS01ORF15730P | |
| 15735 | 105 aa hypothetical protein | |||
| 15740 | chromosome segregation protein SMC | |||
| 15745 | S | S.PspAK6UORFGP (100% identity) | S.PaeDHS01ORF15730P | |
| 15750 | R | PaeRN21ORF2494P (100% identity) | PaeDHS01ORF15730P | |
| 15755 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3220 | 351 aa hypothetical protein | |||
| 3225 | M | M.PaeR031ORFEP (100% identity) | M.PaeDHS01ORF3225P | |
| 3230 | ATP-binding protein | |||
| 3725 | 106 aa hypothetical protein | |||
| 3730 | M | M.PspAK6UORFHP (100% identity) | M.PaeDHS01ORFAP | |
| ??? | 576 aa hypothetical protein PputGB1_0527 | |||
| 3735 | V | V.PaeRN21ORF739P (100% identity) | V.PaeDHS01ORFAP | |
| 3740 | 233 aa hypothetical protein | |||
| 4250 | 143 aa hypothetical protein | |||
| 4255 | M | M.PaeII40ORF869P (100% identity) | M.PaeDHS01ORF25265P | |
| 4260 | 142 aa hypothetical protein | |||
| 12290 | 142 aa hypothetical protein | |||
| 12295 | M | M2.PaeDHS29ORF17705P (100% identity) | M1.PaeDHS01ORF16550P | |
| 12300 | M | M1.PaeDHS29ORF17705P (100% identity) | M2.PaeDHS01ORF16550P | |
| 12305 | 69 aa hypothetical protein | |||
| 14175 | 185 aa hypothetical protein | |||
| 14180 | M | M.Pmo4ORF9690P (100% identity) | M.PaeDHS01ORF23155P | |
| 14185 | DNA topoisomerase III | |||
| 23765 | nucleoid-associated protein | |||
| 23770 | M | M.PspHORFAP (100% identity) | M.PaeDHS01ORF23770P | |
| 23775 | DNA-binding protein | |||
| 31135 | conjugal transfer protein TraR | |||
| 31140 | M | M.PaeRN21ORF6287P (100% identity) | M.PaeDHS01ORF31140P | |
| 31145 | 62 aa hypothetical protein | |||
| Chromosome | ||||
| 25260 | 142 aa hypothetical protein | |||
| 25265 | M | M.PaeII40ORF869P (100% identity) | M.PaeDHS01ORF25265P | |
| 25270 | 143 aa hypothetical protein | |||
| 23150 | 252 aa hypothetical protein | |||
| 23155 | M | M.Pmo4ORF9690P (100% identity) | M.PaeDHS01ORF23155P | |
| 25775 | 163 aa hypothetical protein | |||
| 25780 | V | V.PaeRN21ORF739P (100% identity) | V.PaeDHS01ORFAP | |
| ??? | M | M.PspAK6UORFHP (100% identity) | M.PaeDHS01ORFAP | |
| 25785 | 105 aa hypothetical protein | |||
| 16545 | LexA repressor | |||
| 16550 | M | M2.PaeDHS29ORF17705P (100% identity) | M1.PaeDHS01ORF16550P | |
| 16555 | M | M1.PaeDHS29ORF17705P (100% identity) | M2.PaeDHS01ORF16550P | |
| 16560 | 142 aa hypothetical protein | |||
| 30905 | 68 aa hypothetical protein | |||
| 30910 | M | M.PaeRN21ORF6287P (99% identity) | M.PaeDHS01ORF30910P | |
| 30915 | 62 aa hypothetical protein | |||
| 5565 | DNA-binding protein | |||
| 5570 | M | M.PspHORFAP (99% identity) | M.PaeDHS01ORF5570P | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25925 | ATP-dependent endonuclease | |||
| 25930 | R | PspP16ORFGP (100% identity) | PaeDHS01ORF3640P | |
| ??? | M | M.PspP16ORFGP (100% identity) | M.PaeDHS01ORF3640P | |
| 25940 | 707 aa hypothetical protein | |||
| Chromosome | ||||
| 3635 | 707 aa hypothetical protein | |||
| 3640 | M | M.PspP16ORFGP (100% identity) | M.PaeDHS01ORF3640P | |
| 3645 | R | PspP16ORFGP (100% identity) | PaeDHS01ORF3640P | |
| 3650 | ATP-dependent OLD family endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13070 | DNA methyltransferase | |||
| ??? | R | PaeRN21MrrP (100% identity) | PaeDHS01MrrP | |
| Chromosome | ||||
| 15720 | regulatory protein | |||
| 15725 | R | PaeRN21MrrP (100% identity) | PaeDHS01MrrP | |
| 15730 | DNA methyltransferase | |||