Escherichia coli S5274 |
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Putative Escherichia coli S5274 RM systems
Ref: Hazen,T.H. et al. Genome Announc 2 (3), e00582-14 (2014)
REBASE ref # 17826
Contig set: 5,164,248 bp
GenBank #: JICB00000000 (NZ_JICB00000000)
REBASE acronym: EcoS5274
Org_num: 13340
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | EcoS7380ORFEP (100% identity) | EcoS5274ORFMP | |
| ??? | S | S.EcoS7380ORFEP (100% identity) | S.EcoS5274ORFMP | |
| ??? | M | M.SflN110ORF19045P (100% identity) | M.EcoS5274ORFMP | |
| ??? | ATP-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | DNA methylase family protein | M.EcoS5274ORFFP | |
| ??? | M | DNA adenine methylase, partial | M.EcoS5274ORFIP | |
| ??? | M | DNA methylase family protein, partial | M.EcoS5274ORFJP | |
| ??? | M | M.EcoS7438ORFNP (47% identity) | M.EcoS5274ORFNP | |
| ??? | M | M.EcoSO40ORF27175P (100% identity) | GATC | M.EcoS5274ORFLP |
| ??? | M | M.EcoS7380ORFJP (100% identity) | GATC | M.EcoS5274ORFHP |
| ??? | M | M.EcoS7380ORFIP (100% identity) | GATC | M.EcoS5274ORFEP |
| ??? | M | M.EcoS7380ORFGP (100% identity) | M.EcoS5274ORFBP | |
| ??? | M | M.EcoS7380ORFHP (100% identity) | M.EcoS5274ORFGP | |
| ??? | M | M.EcoS7380ORFCP (100% identity) | M.EcoS5274ORFAP | |
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoS5274DamP |
| ??? | M | M.EcoSO40ORF23900P (100% identity) | GATC | M.EcoS5274ORFKP |
| ??? | M | M.EcoS7380ORFAP (100% identity) | ATGCAT | M.EcoS5274ORFCP |
| ??? | V | V.SflFF59DcmP (100% identity) | V.EcoS5274DcmP | |
| ??? | M | M.EcoS7380DcmP (100% identity) | CCWGG | M.EcoS5274DcmP |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | type I restriction-modification system, M subunit | |||
| ??? | R | EcoS7380McrBP (100% identity) | EcoS5274McrBP | |
| ??? | R | SflSTLE4McrCP (100% identity) | EcoS5274McrCP | |