Xenorhabdus doucetiae FRM16 |
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Putative Xenorhabdus doucetiae FRM16 RM systems
Ref: Genoscope -,C.E.A. unpublished
REBASE ref # 10128
Complete sequence: 4,195,202 bp
GenBank #: FO704550
REBASE acronym: Xdo16
Org_num: 13378
All begin XDD1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2947 | conserved exported protein of unknown function | |||
| 2948 | M | M.XneXORFDP (94% identity) | M.Xdo16ORF2948P | |
| 2949 | S | S.Eho173ORFAP (61% identity) | S.Xdo16ORF2948P | |
| 2950 | R | XneXORFDP (95% identity) | Xdo16ORF2948P | |
| 2951 | Lysyl-tRNA synthetase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23 | conserved protein of unknown function | |||
| 24 | RM | EclVIM1ORF4140AP (46% identity) | Xdo16ORF24P | |
| 25 | atpase involved in dna repair | |||
| 67 | Ribulose-phosphate 3-epimerase | |||
| 68 | M | M.XspTCT1DamP (95% identity) | GATC | M.Xdo16DamP |
| 69 | membrane protein | |||
| 690 | conserved protein of unknown function | |||
| 691 | R | XbuC72ORF17175P (87% identity) | Xdo16ORF691P | |
| 692 | conserved protein of unknown function | |||
| 698 | conserved protein of unknown function | |||
| 699 | M | M.VanPF4SSORF830P (67% identity) | M.Xdo16ORF699P | |
| 700 | protein of unknown function | |||
| 701 | conserved protein of unknown function | |||
| 702 | Inner membrane ABC transporter permease protein | |||
| 704 | V | Very short patch repair protein | V.Xdo16ORF699P | |
| 705 | protein of unknown function | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 716 | protein of unknown function | |||
| 717 | R | 5-methylcytosine-specific restriction | Xdo16McrBAP | |
| 718 | transposase | |||
| 719 | R | Pag9381McrBP (60% identity) | Xdo16McrBBP | |
| 720 | R | BfeH4C11McrCP (79% identity) | Xdo16McrCP | |
| 721 | Ribosomal RNA small subunit methyltransferase C | |||