Frankia species Thr |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Frankia species Thr RM systems
Ref: Hurst,S.G. IV et al. Genome Announc 2 (3), e00493-14 (2014)
REBASE ref # 17690
GenBank #: JENI00000000
REBASE acronym: FspThr
Org_num: 13100
All begin ThrDRAFT_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4612 | metal-dependent hydrolase | |||
| 4613 | R | FspCORF4014P (100% identity) | FspThrORF4613P | |
| ??? | S | S.FspCORF4014P (100% identity) | S.FspThrORF4613P | |
| 676 | 76 aa hypothetical protein | |||
| 677 | M | M.FspCORF192P (100% identity) | M.FspThrORF677P | |
| 678 | S | S.FspCORF192P (100% identity) | S.FspThrORF677P | |
| 679 | R | FspCORF192P (100% identity) | FspThrORF677P | |
| 680 | 752 aa hypothetical protein | |||
| 2584 | 476 aa hypothetical protein | |||
| ??? | M | M.FspCORF4014P (100% identity) | M.FspThrORF2585P | |
| 2586 | 63 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4558 | 132 aa hypothetical protein | |||
| 4559 | RM | FspCORF1101P (100% identity) | FspThrORF4559P | |
| 4560 | 70 aa hypothetical protein | |||
| 3442 | serine/threonine protein kinase | |||
| 3443 | RM | FspCORF2953P (100% identity) | FspThrORF3443P | |
| 3444 | 1227 aa hypothetical protein | |||
| 2513 | 1107 aa hypothetical protein | |||
| 2514 | RM | FspCORF2728P (99% identity) | FspThrORF2514P | |
| 2515 | 181 aa hypothetical protein | |||
| 1851 | serine/threonine protein kinase | |||
| 1852 | M | M.FspCcI6ORF2668P (100% identity) | M.FspThrORF1852P | |
| 1853 | 642 aa hypothetical protein | |||
| 1199 | 105 aa hypothetical protein | |||
| ??? | M | M.FspCeDORF4316P (100% identity) | CCCGGG | M.FspThrORF1200P |
| 1201 | 97 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 636 | 307 aa hypothetical protein | |||
| ??? | R | restriction endonuclease | FspThrMrrP | |
| 639 | 1142 aa hypothetical protein | |||
| 2235 | carbohydrate ABC transporter membrane protein 2, | |||
| 2236 | R | FspCcI6McrCP (100% identity) | FspThrMcrCP | |
| 2237 | R | FspCMcrBP (100% identity) | FspThrMcrBP | |
| 2238 | 414 aa hypothetical protein | |||
| 2314 | 104 aa hypothetical protein | |||
| 2315 | R | FspCeDMrr3P (100% identity) | FspThrMrr3P | |
| 2316 | acetyltransferase, ribosomal protein | |||
| 2326 | 300 aa hypothetical protein | |||
| 2327 | R | FspCcI6Mrr3P (100% identity) | FspThrMrr2P | |
| 2328 | 50 aa hypothetical protein | |||