Clostridium species ASF356 |
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Putative Clostridium species ASF356 RM systems
Ref: Wannemuehler,M.J. et al. Genome Announc 2 (2), e00287-14 (2014)
REBASE ref # 17532
Contig set: 2,900,700 bp
GenBank #: AQFQ00000000 (NZ_AQFQ00000000)
REBASE acronym: Csp356
Org_num: 12830
All begin C820_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1855 | S | S2.Csp356ORF1853P (86% identity) | S.Csp356ORF1855P | |
| 1856 | R | AspmYitORF746P (59% identity) | Csp356ORF1855P | |
| 1857 | 120 aa hypothetical protein | |||
| 1852 | 77 aa hypothetical protein | |||
| 1853 | M | M.CspC1ORF1820P (76% identity) | M.Csp356ORF1853P | |
| 1854 | S | S1.Csp356ORF1853P (88% identity) | S.Csp356ORF1853P | |
| 2048 | 77 aa hypothetical protein | |||
| 2049 | M | M.Bsp2032II (85% identity) | M.Csp356ORF2049P | |
| 2050 | 96 aa hypothetical protein | |||
| 2051 | HI0074 family nucleotidyltransferase substrate | |||
| 2052 | S | S1.CgaBS1III (65% identity) | S.Csp356ORF2049P | |
| 2053 | 175 aa hypothetical protein | |||
| ??? | R | EliB2IP (78% identity) | Csp356ORF2049P | |
| 2056 | 145 aa hypothetical protein | |||
| 116 | 894 aa hypothetical protein | |||
| 117 | M | M.DfeGSS09ORF9075P (74% identity) | M.Csp356ORF117P | |
| 118 | S | S3.Tsu2489ORF1099P (55% identity) | S.Csp356ORF117P | |
| 119 | 60 aa hypothetical protein | |||
| 120 | R | Rga19829ORF7420P (65% identity) | Csp356ORF117P | |
| 121 | 296 aa hypothetical protein | |||
| 153 | 1A family penicillin-binding protein | |||
| 155 | M | M.PmeBin172ORFHP (84% identity) | M.Csp356ORF155P | |
| 156 | S | S1.PmeBin164ORFBP (54% identity) | S1.Csp356ORF155P | |
| 157 | S | S2.PmeBin175ORFGP (41% identity) | S2.Csp356ORF155P | |
| 158 | S | S.Ssp29892ORF7470P (42% identity) | S3.Csp356ORF155P | |
| 159 | R | PmeBin164ORFBP (82% identity) | Csp356ORF155P | |
| 160 | 152 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2010 | phage phi LC3 family holin | |||
| 2011 | M | M.PmeBin461ORFBP (65% identity) | M1.Csp356ORF2011P | |
| 2012 | 226 aa hypothetical protein | |||
| 2013 | M | M.Csp356ORF252P (72% identity) | M2.Csp356ORF2011P | |
| 2014 | 213 aa hypothetical protein | |||
| 2855 | M | M.Msp190616ORF1720P (46% identity) | GANTC | M.Csp356ORF2855P |
| 2856 | 156 aa hypothetical protein | |||
| 2093 | 259 aa hypothetical protein | |||
| 2094 | RM | PmeBin165ORFFP (60% identity) | CAGCAG | Csp356ORF2094P |
| 2095 | 77 aa hypothetical protein | |||
| 588 | 226 aa hypothetical protein | |||
| 589 | M | M.Bla1821LORF21485P (39% identity) | CTSAG | M.Csp356ORF589P |
| 590 | phage phi LC3 family holin | |||
| 1895 | 124 aa hypothetical protein | |||
| 1896 | M | M.PmeBin537ORFCP (94% identity) | CTSAG | M.Csp356ORF1896P |
| 1897 | 262 aa hypothetical protein | |||
| 2649 | 290 aa hypothetical protein | |||
| 2650 | M | M2.Lsp684ORF645P (58% identity) | GASTC | M.Csp356ORF2650P |
| 2651 | tryptophan-tRNA ligase | |||
| 251 | 225 aa hypothetical protein | |||
| 252 | M | M2.Csp356ORF2011P (72% identity) | M.Csp356ORF252P | |
| 253 | 3-phosphoshikimate 1-carboxyvinyltransferase | |||
| 1956 | 217 aa hypothetical protein | |||
| ??? | M | M.Cha13479ORF3203P (36% identity) | YGGCCR | M.Csp356ORFAP |
| 1957 | 88 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1791 | 23S rRNA (uracil-5-)-methyltransferase RumA | |||
| 1792 | R | Msp3756McrCP (63% identity) | Csp356McrCP | |
| 1793 | R | Lla161McrBP (56% identity) | Csp356McrBP | |
| 1794 | 358 aa hypothetical protein | |||