Salmonella enterica subsp. enterica serovar Typhimurium 138736 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium 138736 RM systems
Ref: Desai,P.T. and Mcclelland,M. unpublished
REBASE ref # 17481
| Sequence length: | GenBank #: | |
| Chromosome: | 4,933,618 bp | CP007581 |
| plasmid unnamed: | 91,739 bp | CP007582 |
REBASE acronym: Sen138736
Org_num: 12687
All begin CY43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23545 | endoribonuclease SymE | |||
| 23550 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen138736ORF23555P |
| 23555 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen138736ORF23555P |
| 23560 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen138736ORF23555P |
| 23565 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10470 | multidrug DMT transporter | |||
| 10475 | V | very short patch repair endonuclease | V.Sen138736DcmP | |
| 10480 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen138736DcmP |
| 10485 | hydrolase | |||
| 13970 | crossover junction endodeoxyribonuclease | |||
| 13975 | M | M.Sty13348ORF110P (100% identity) | GATC | M.Sen138736ORF13975P |
| 13980 | 160 aa hypothetical protein | |||
| 17625 | Fis family transcriptional regulator | |||
| 17630 | M | methyltransferase | ATGCAT | M.Sen138736ORF17630P |
| 17635 | membrane protein | |||
| 18110 | ribulose-phosphate 3-epimerase | |||
| 18115 | M | DNA adenine methylase | GATC | M.Sen138736DamP |
| 18120 | cell division protein DamX | |||
| 23400 | spermidine/putrescine ABC transporter ATPase | |||
| 23405 | RM | StyUK1IV (100% identity) | GATCAG | Sen138736ORF23405P |
| 23410 | DNA repair protein | |||
| plasmid unnamed | ||||
| 24280 | 62 aa hypothetical protein | |||
| 24285 | M | M.StyUK1ORFAP (100% identity) | M.Sen138736ORF24285P | |
| 24290 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2105 | sugar transporter | |||
| 2110 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen138736ORF2110P |
| 2115 | R | StyUK1IP (99% identity) | CAGAG | Sen138736ORF2110P |
| 2120 | cytochrome D ubiquinol oxidase subunit I | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23560 | DEAD/DEAH box helicase | |||
| 23565 | R | StyUK1MrrP (100% identity) | Sen138736MrrP | |
| 23570 | membrane protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10700 | crossover junction endodeoxyribonuclease | |||
| 10705 | M | M.StyUK1V (100% identity) | GATC | M.Sen138736ORF10705P |
| 10710 | 160 aa hypothetical protein | |||