Salmonella enterica subsp. enterica serovar Enteritidis SA20100349 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Enteritidis SA20100349 RM systems
Ref: Rehman,A. and Nash,J.H.E. unpublished
REBASE ref # 17688
Complete sequence: 4,685,835 bp
GenBank #: CP007361
REBASE acronym: Sen349
Org_num: 12602
All begin AU60_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 30140 | transporter | |||
| 40930 | R | SenSA608ORF19700P (100% identity) | GGYANNNNNNTCG | Sen349ORF40935P |
| 30160 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen349ORF40935P |
| 40935 | M | M.Sen994ORF39715P (99% identity) | GGYANNNNNNTCG | M.Sen349ORF40935P |
| 40940 | 90 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 33080 | hydrolase | |||
| 33085 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen349DcmP |
| 33090 | V | V.StyUK1DcmP (100% identity) | V.Sen349DcmP | |
| 33095 | drug/metabolite exporter YedA | |||
| 22675 | Fis family transcriptional regulator | |||
| 22680 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen349ORF22680P |
| 38710 | 54 aa hypothetical protein | |||
| 23280 | ribulose phosphate epimerase | |||
| 23285 | M | M.StyTDamP (100% identity) | GATC | M.Sen349DamP |
| 38855 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2375 | sugar transporter | |||
| ??? | M | M.SspSAL045ORF17295P (88% identity) | CAGAG | M.Sen349ORF2380P |
| ??? | R | hypothetical protein | CAGAG | Sen349ORF2380P |
| 2420 | 62 aa hypothetical protein | |||
| 31350 | sugar transporter | |||
| 31355 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen349ORF31355P |
| ??? | R | SenSL913ORF3124P (100% identity) | CAGAG | Sen349ORF31355P |
| 31365 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 40935 | DNA methyltransferase | |||
| ??? | R | Ssp3CMrrP (100% identity) | Sen349MrrP | |
| 30185 | restriction endonuclease subunit M | |||