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Putative Salmonella enterica subsp. enterica serovar Enteritidis EC20100130 RM systems
Ref: Rehman,A. and Nash,J.H.E. unpublished
REBASE ref # 17688
Complete sequence: 4,685,849 bp
GenBank #: CP007358
REBASE acronym: Sen130
Org_num: 12599
All begin AU42_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
22050 | transporter | |||
22055 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Sen130ORF22065P |
22060 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen130ORF22065P |
22065 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen130ORF22065P |
22070 | 90 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
5235 | hydrolase | |||
5240 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen130DcmP |
5245 | V | very short patch repair endonuclease | V.Sen130DcmP | |
5250 | drug/metabolite exporter YedA | |||
15645 | replication protein A | |||
15650 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen130ORF15650P |
15655 | 77 aa hypothetical protein | |||
16550 | Fis family transcriptional regulator | |||
16555 | M | methyltransferase | ATGCAT | M.Sen130ORF16555P |
16560 | 54 aa hypothetical protein | |||
17030 | ribulose phosphate epimerase | |||
17035 | M | DNA adenine methylase | GATC | M.Sen130DamP |
17040 | cell division protein DamX | |||
21930 | integrase | |||
21935 | R | SspSAL045ORF19515P (100% identity) | GAAC | Sen130ORF21935P |
21940 | 238 aa hypothetical protein | |||
22470 | 113 aa hypothetical protein | |||
22475 | M | M.SspA39ORFGP (100% identity) | GATC | M.Sen130ORF22475P |
22480 | 75 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
1710 | sugar transporter | |||
1715 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen130ORF1715P |
??? | R | SenSL913ORF3124P (100% identity) | CAGAG | Sen130ORF1715P |
23220 | 33 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
22065 | DNA methyltransferase | |||
??? | R | Ssp3CMrrP (100% identity) | Sen130MrrP | |
22090 | restriction endonuclease subunit M |