Salmonella enterica subsp. enterica serovar Enteritidis EC20120229 |
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Putative Salmonella enterica subsp. enterica serovar Enteritidis EC20120229 RM systems
Ref: Rehman,A. and Nash,J.H.E. unpublished
REBASE ref # 17688
Complete sequence: 4,685,832 bp
GenBank #: CP007346
REBASE acronym: Sen229
Org_num: 12588
All begin AV25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24750 | transporter | |||
| 24755 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Sen229ORF24765P |
| 24760 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen229ORF24765P |
| 24765 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen229ORF24765P |
| 26220 | 90 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5910 | hydrolase | |||
| 5915 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen229DcmP |
| 5920 | V | V.StyUK1DcmP (100% identity) | V.Sen229DcmP | |
| 5925 | drug/metabolite exporter YedA | |||
| 18500 | Fis family transcriptional regulator | |||
| 18505 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen229ORF18505P |
| 25980 | 54 aa hypothetical protein | |||
| 19030 | ribulose phosphate epimerase | |||
| 19035 | M | DNA adenine methylase | GATC | M.Sen229DamP |
| 19040 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1920 | sugar transporter | |||
| 1925 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen229ORF1925P |
| ??? | R | SenSL913ORF3124P (100% identity) | CAGAG | Sen229ORF1925P |
| 25275 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24765 | DNA methyltransferase | |||
| ??? | R | Ssp3CMrrP (100% identity) | Sen229Mrr2P | |
| 24780 | restriction endonuclease subunit M | |||
| 24765 | DNA methyltransferase | |||
| ??? | R | SenSE10MrrP (100% identity) | Sen229MrrP | |
| 24780 | restriction endonuclease subunit M | |||