Salmonella enterica subsp. enterica serovar Enteritidis SA20082034 |
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Putative Salmonella enterica subsp. enterica serovar Enteritidis SA20082034 RM systems
Ref: Rehman,A. and Nash,J.H.E. unpublished
REBASE ref # 17688
Complete sequence: 4,685,659 bp
GenBank #: CP007425
REBASE acronym: Sen034
Org_num: 12660
All begin AU66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 46465 | transporter | |||
| 46470 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Sen034ORF46475P |
| 31630 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen034ORF46475P |
| 46475 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen034ORF46475P |
| 46480 | 90 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 35720 | hydrolase | |||
| 35725 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen034DcmP |
| 35730 | V | very short patch repair endonuclease | V.Sen034DcmP | |
| 7515 | drug/metabolite exporter YedA | |||
| 38740 | crossover junction endodeoxyribonuclease | |||
| 38745 | M | M.Ssp89ORF1824P (100% identity) | GATC | M.Sen034ORF38745P |
| 14035 | 157 aa hypothetical protein | |||
| 23350 | Fis family transcriptional regulator | |||
| 23355 | M | methyltransferase | ATGCAT | M.Sen034ORF23355P |
| 43090 | 54 aa hypothetical protein | |||
| 43350 | ribulose-phosphate 3-epimerase | |||
| 24015 | M | DNA adenine methylase | GATC | M.Sen034DamP |
| 43355 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2655 | 64 aa hypothetical protein | |||
| 2670 | M | 199 aa hypothetical protein | CAGAG | M.Sen034ORF2670P |
| ??? | R | hypothetical protein | CAGAG | Sen034ORF2670P |
| 2690 | cytochrome D ubiquinol oxidase subunit I | |||
| 33265 | sugar transporter | |||
| 33270 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen034ORF33270P |
| ??? | R | SenSL913ORF3124P (100% identity) | CAGAG | Sen034ORF33270P |
| 33280 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 46475 | DNA methyltransferase | |||
| ??? | R | SenSE86MrrP (100% identity) | Sen034MrrP | |
| 31655 | restriction endonuclease subunit M | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24000 | tryptophanyl-tRNA synthetase | |||
| 24015 | M | DNA adenine methylase | GATC | M.Sen034ORF24015P |
| 24040 | shikimate kinase | |||