Salmonella enterica subsp. enterica serovar Enteritidis EC20120007 |
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Putative Salmonella enterica subsp. enterica serovar Enteritidis EC20120007 RM systems
Ref: Rehman,A. and Nash,J.H.E. unpublished
REBASE ref # 17688
Complete sequence: 4,685,849 bp
GenBank #: CP007331
REBASE acronym: Sen007
Org_num: 12573
All begin AU47_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 25100 | transporter | |||
| 25105 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Sen007ORF25115P |
| 25110 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen007ORF25115P |
| 25115 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen007ORF25115P |
| 27030 | 90 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5890 | hydrolase | |||
| 5895 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen007DcmP |
| 5900 | V | very short patch repair endonuclease | V.Sen007DcmP | |
| 5905 | multidrug DMT transporter | |||
| 14935 | endonuclease | |||
| 14940 | M | M.SspA39ORFGP (100% identity) | GATC | M.Sen007ORF14940P |
| 14945 | 75 aa hypothetical protein | |||
| 17765 | replication protein A | |||
| 17770 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen007ORF17770P |
| 17775 | 77 aa hypothetical protein | |||
| 18780 | Fis family transcriptional regulator | |||
| 18785 | M | methyltransferase | ATGCAT | M.Sen007ORF18785P |
| 26745 | 54 aa hypothetical protein | |||
| 19305 | ribulose phosphate epimerase | |||
| 19310 | M | DNA adenine methylase | GATC | M.Sen007DamP |
| 19315 | cell division protein DamX | |||
| 24945 | integrase | |||
| 24960 | R | SspSAL045ORF19515P (100% identity) | GAAC | Sen007ORF24960P |
| 24965 | 238 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1915 | sugar transporter | |||
| 1920 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen007ORF1920P |
| ??? | R | SenSL913ORF3124P (100% identity) | CAGAG | Sen007ORF1920P |
| 26125 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25115 | DNA methyltransferase | |||
| ??? | R | Ssp3CMrrP (100% identity) | Sen007MrrP | |
| 25130 | restriction endonuclease subunit M | |||