Salmonella enterica subsp. enterica serovar Enteritidis EC20120003 |
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Putative Salmonella enterica subsp. enterica serovar Enteritidis EC20120003 RM systems
Ref: Rehman,A. and Nash,J.H.E. unpublished
REBASE ref # 17688
Complete sequence: 4,685,974 bp
GenBank #: CP007330
REBASE acronym: Sen003
Org_num: 12572
All begin AU45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24705 | transporter | |||
| 24710 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Sen003ORF24720P |
| 24715 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen003ORF24720P |
| 24720 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen003ORF24720P |
| 26830 | 90 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5905 | hydrolase | |||
| 5910 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen003DcmP |
| 5915 | V | very short patch repair endonuclease | V.Sen003DcmP | |
| 5920 | multidrug DMT transporter | |||
| 18480 | Fis family transcriptional regulator | |||
| 18485 | M | methyltransferase | ATGCAT | M.Sen003ORF18485P |
| 26595 | 54 aa hypothetical protein | |||
| 19025 | ribulose phosphate epimerase | |||
| 19030 | M | DNA adenine methylase | GATC | M.Sen003DamP |
| 19035 | cell division protein DamX | |||
| 24550 | integrase | |||
| 24565 | R | SspSAL045ORF19515P (100% identity) | GAAC | Sen003ORF24565P |
| 24570 | 238 aa hypothetical protein | |||
| 25865 | endonuclease | |||
| 25870 | M | M.SspA39ORFGP (100% identity) | GATC | M.Sen003ORF25870P |
| 25875 | 75 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1930 | sugar transporter | |||
| 1935 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen003ORF1935P |
| ??? | R | SenSL913ORF3124P (100% identity) | CAGAG | Sen003ORF1935P |
| 25990 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24720 | DNA methyltransferase | |||
| ??? | R | Ssp3CMrrP (100% identity) | Sen003MrrP | |
| 24735 | restriction endonuclease subunit M | |||