Salmonella enterica subsp. enterica serovar Enteritidis EC20120002 |
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Putative Salmonella enterica subsp. enterica serovar Enteritidis EC20120002 RM systems
Ref: Rehman,A. and Nash,J.H.E. unpublished
REBASE ref # 17688
Complete sequence: 4,679,418 bp
GenBank #: CP007329
REBASE acronym: Sen002
Org_num: 12571
All begin AU44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24640 | transporter | |||
| 24645 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Sen002ORF24655P |
| 24650 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen002ORF24655P |
| 24655 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen002ORF24655P |
| 27055 | 90 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5900 | hydrolase | |||
| 5905 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen002DcmP |
| 5910 | V | very short patch repair endonuclease | V.Sen002DcmP | |
| 5915 | multidrug DMT transporter | |||
| 25810 | endonuclease | |||
| 25815 | M | M.SspA39ORFGP (100% identity) | GATC | M.Sen002ORF25815P |
| 25820 | 75 aa hypothetical protein | |||
| 18460 | Fis family transcriptional regulator | |||
| 18465 | M | methyltransferase | ATGCAT | M.Sen002ORF18465P |
| 26740 | membrane protein | |||
| 18990 | ribulose-phosphate 3-epimerase | |||
| 18995 | M | DNA adenine methylase | GATC | M.Sen002DamP |
| 19000 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1925 | sugar transporter | |||
| 1930 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen002ORF1930P |
| ??? | R | SenSL913ORF3124P (100% identity) | CAGAG | Sen002ORF1930P |
| 26020 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24655 | DNA methyltransferase | |||
| ??? | R | Ssp3CMrrP (100% identity) | Sen002Mrr2P | |
| ??? | 342 aa hypothetical protein | |||
| ??? | 388 aa hypothetical protein | |||
| ??? | R | SenSE10MrrP (100% identity) | Sen002MrrP | |
| 24670 | restriction endonuclease subunit M | |||