Salmonella enterica subsp. enterica serovar Enteritidis EC20121177 |
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Putative Salmonella enterica subsp. enterica serovar Enteritidis EC20121177 RM systems
Ref: Rehman,A. and Nash,J.H.E. unpublished
REBASE ref # 17688
Complete sequence: 4,685,848 bp
GenBank #: CP007333
REBASE acronym: Sen177
Org_num: 12575
All begin AV72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20135 | nitrate reductase | |||
| 20150 | R | StySBLI (90% identity) | GGYANNNNNNTCG | Sen177ORF20150P |
| 20155 | S | 122 aa hypothetical protein | GGYANNNNNNTCG | S.Sen177ORF20150P |
| 20160 | long polar fimbrial protein LpfE | |||
| 24620 | acetolactate synthase 2 regulatory subunit | |||
| ??? | S | hypothetical protein | S.Sen177ORF24625P | |
| 24630 | C4-dicarboxylate transporter | |||
| 14195 | transporter | |||
| 20150 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Sen177ORF23470P |
| 35605 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen177ORF23470P |
| 23470 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen177ORF23470P |
| 23465 | 90 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25380 | hydrolase | |||
| 25375 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen177DcmP |
| 25370 | V | V.StyUK1DcmP (100% identity) | V.Sen177DcmP | |
| 32725 | drug/metabolite exporter YedA | |||
| 775 | crossover junction endodeoxyribonuclease | |||
| 780 | M | M.Ssp89ORF1824P (100% identity) | GATC | M.Sen177ORF780P |
| 785 | 157 aa hypothetical protein | |||
| 18940 | 2-keto-3-deoxy-L-rhamnonate aldolase | |||
| 18950 | M | adenine methylase | GATC | M.Sen177DamP |
| 18955 | ribulose-phosphate 3-epimerase | |||
| 34545 | Fis family transcriptional regulator | |||
| 16795 | M | methyltransferase | ATGCAT | M.Sen177ORF16795P |
| 34550 | 54 aa hypothetical protein | |||
| 18955 | ribulose phosphate epimerase | |||
| 34640 | M | DNA adenine methylase | GATC | M.Sen177Dam2P |
| 34645 | cell division protein DamX | |||
| 30950 | 115 aa hypothetical protein | |||
| 30955 | M | 92 aa hypothetical protein | ATGCAT | M.Sen177ORF30955P |
| 30960 | 65 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18830 | sugar transporter | |||
| 4175 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen177ORF4175P |
| ??? | R | SenSL913ORF3124P (100% identity) | CAGAG | Sen177ORF4175P |
| 32080 | 33 aa hypothetical protein | |||
| 4170 | 61 aa hypothetical protein | |||
| 4175 | M | type III restriction-modification system enzyme modification methylase | CAGAG | M.Sen177ORFBP |
| ??? | type III restriction-modification system DNA helicase | |||
| 18815 | 4-hydroxy-3-methylbut-2-enyl diphosphate | |||
| 18825 | M | DNA methyltransferase | CAGAG | M.Sen177ORF18825P |
| 18830 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23470 | DNA methyltransferase | |||
| ??? | R | SenNCTR380MrrP (100% identity) | Sen177MrrP | |
| 35620 | restriction endonuclease subunit M | |||
| 23470 | DNA methyltransferase | |||
| ??? | R | SenSE86MrrP (100% identity) | Sen177Mrr3P | |
| 35620 | restriction endonuclease subunit M | |||