Salmonella enterica subsp. enterica serovar Enteritidis SA19981857 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Enteritidis SA19981857 RM systems
Ref: Rehman,A. and Nash,J.H.E. unpublished
REBASE ref # 17688
Complete sequence: 4,685,848 bp
GenBank #: CP007288
REBASE acronym: Sen288
Org_num: 12517
All begin AU64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 25040 | transporter | |||
| 25045 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Sen288ORF25055P |
| 25050 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen288ORF25055P |
| 25055 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen288ORF25055P |
| 26495 | 90 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5920 | hydrolase | |||
| 5925 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen288DcmP |
| 5930 | V | V.StyUK1DcmP (100% identity) | V.Sen288DcmP | |
| 5935 | drug/metabolite exporter YedA | |||
| 11325 | crossover junction endodeoxyribonuclease | |||
| 11330 | M | M.Ssp89ORF1824P (100% identity) | GATC | M.Sen288ORF11330P |
| 11335 | 157 aa hypothetical protein | |||
| 18775 | Fis family transcriptional regulator | |||
| 18780 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen288ORF18780P |
| 26260 | 54 aa hypothetical protein | |||
| 19305 | ribulose phosphate epimerase | |||
| 19310 | M | M.StyTDamP (100% identity) | GATC | M.Sen288DamP |
| 19315 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1930 | sugar transporter | |||
| 1935 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen288ORF1935P |
| ??? | R | SenSL913ORF3124P (100% identity) | CAGAG | Sen288ORF1935P |
| 25570 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25055 | DNA methyltransferase | |||
| ??? | R | SenSE86MrrP (100% identity) | Sen288MrrP | |
| 25070 | restriction endonuclease subunit M | |||