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Putative Salmonella enterica subsp. enterica serovar Enteritidis EC20121180 RM systems
Ref: Rehman,A. and Nash,J.H.E. unpublished
REBASE ref # 17688
Complete sequence: 4,685,848 bp
GenBank #: CP007273
REBASE acronym: Sen180
Org_num: 12505
All begin AV75_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
17890 | RNA polymerase-binding transcription factor | |||
17895 | R | StySBLI (93% identity) | Sen180ORF17895P | |
17900 | S | 275 aa hypothetical protein | S.Sen180ORF17895P | |
17905 | SsrA-binding protein | |||
27590 | pseudogene | |||
27600 | S | type I restriction-modification protein subunit | S.Sen180ORF27600P | |
27605 | acid phosphatase | |||
9490 | transporter | |||
17895 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Sen180ORF22955P |
37155 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen180ORF22955P |
22955 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen180ORF22955P |
22960 | 90 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
34170 | hydrolase | |||
34175 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen180DcmP |
27305 | V | V.StyUK1DcmP (100% identity) | V.Sen180DcmP | |
34180 | drug/metabolite exporter YedA | |||
2620 | crossover junction endodeoxyribonuclease | |||
2615 | M | M.Ssp89ORF1824P (100% identity) | GATC | M.Sen180ORF2615P |
2610 | 157 aa hypothetical protein | |||
18405 | 65 aa hypothetical protein | |||
18425 | M | M.Sfl60ORF25670P (100% identity) | M.Sen180ORF18425P | |
18430 | pseudogene | |||
36100 | Fis family transcriptional regulator | |||
28060 | M | methyltransferase | ATGCAT | M.Sen180ORF28060P |
36105 | 54 aa hypothetical protein | |||
10430 | ribulose phosphate epimerase | |||
36200 | M | DNA adenine methylase | GATC | M.Sen180DamP |
12505 | cell division protein DamX | |||
27950 | flagellar rod assembly protein FlgJ | |||
27955 | M | 169 aa hypothetical protein | ATGCAT | M.Sen180ORF27955P |
27965 | 163 aa hypothetical protein | |||
28355 | 297 aa hypothetical protein | |||
28360 | M | pseudogene | M.Sen180ORF28630P | |
28365 | metal-dependent phosphohydrolase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
380 | sugar transporter | |||
375 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen180ORF375P |
??? | R | SenSL913ORF3124P (100% identity) | CAGAG | Sen180ORF375P |
33545 | 33 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
22365 | nitrate reductase | |||
??? | R | SenSL913MrrP (100% identity) | Sen180Mrr2P | |
22385 | citrate lyase subunit gamma | |||
22955 | DNA methyltransferase | |||
??? | R | restriction endonuclease | Sen180MrrP | |
37165 | 148 aa hypothetical protein | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
10430 | ribulose-phosphate 3-epimerase | |||
10435 | M | 131 aa hypothetical protein | GATC | M.Sen180ORF10345P |
10440 | lipopolysaccharide transporter | |||
28355 | 297 aa hypothetical protein | |||
28360 | pseudogene |