Fusobacterium nucleatum subsp. polymorphum 10953 |
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Putative Fusobacterium nucleatum subsp. polymorphum 10953 RM systems
Ref: Karpathy,S.E. et al. unpublished
REBASE ref # 11049
Complete sequence: 2,429,698 bp
GenBank #: CM000440
REBASE acronym: FnuP
Org_num: 5408
All begin FNP_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1311 | manganese (Mn2+), zinc (Zn2+) ABC superfamily | |||
| 1312 | M | M.Fpo10562ORF3030P (100% identity) | M.FnuPORF1312P | |
| 1313 | S | S1.Fpo10562ORF3030P (100% identity) | S1.FnuPORF1312P | |
| 1314 | S | S2.Fpo10562ORF3030P (100% identity) | S2.FnuPORF1312P | |
| 1315 | 75 aa hypothetical protein | |||
| 1316 | 38 aa hypothetical protein | |||
| 1317 | 26 aa hypothetical protein | |||
| 1318 | possible transposase | |||
| 1319 | 48 aa hypothetical protein | |||
| 1320 | 103 aa hypothetical protein | |||
| 1321 | possible bacteriophage integrase/recombinase | |||
| 1322 | R | Fpo10562ORF3030P (100% identity) | FnuPORF1312P | |
| 1323 | possible AAA+ superfamily ATPase | |||
| 1589 | 107 aa hypothetical protein | |||
| 1590 | M | M.Fpo10562ORF5585P (100% identity) | M.FnuPORF1590P | |
| 1591 | possible transcriptional regulator | |||
| 1592 | S | S1.Fpo10562ORF5585P (99% identity) | S1.FnuPORF1590P | |
| 1593 | S | S2.Fpo10562ORF5585P (100% identity) | S2.FnuPORF1590P | |
| 1594 | R | Fpo10562ORF5585P (100% identity) | FnuPORF1590P | |
| 1595 | flotillin family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2221 | biotin--[acetyl-CoA-carboxylase] ligase | |||
| 2222 | M | M.Fpo43A3ORF9130P (100% identity) | GCATC | M.FnuPORF2222P |
| 2223 | Ars family arsenite-antimonite efflux | |||
| 18 | possible recombinase | |||
| 19 | C | C.Fpo10562ORF6970P (100% identity) | C.FnuPORF20P | |
| 20 | M | M.Fpo10562ORF6970P (100% identity) | GATC | M.FnuPORF20P |
| 21 | R | Fnu10953bORFEP (100% identity) | GATC | FnuPORF20P |
| 22 | 50 aa hypothetical protein | |||
| 1207 | MOP/MATE family multidrug-resistance efflux | |||
| 1208 | R | Fpo10562ORF8350P (100% identity) | FnuPORF1209P | |
| 1209 | M | M.Fpo10562ORF8350P (100% identity) | M.FnuPORF1209P | |
| 1210 | cob(I)yrinic acid a,c-diamide | |||
| 1714 | 486 aa hypothetical protein | |||
| 1715 | R | Fpo10562ORF4350P (100% identity) | ATGCAT | FnuPORF1716P |
| 1716 | M | M.Fpo10562ORF4345P (100% identity) | ATGCAT | M.FnuPORF1716P |
| 1717 | glutamine--fructose-6-phosphate transaminase | |||